RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PLCB4Q15147 1175 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 ZNF174Q15697 407 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 PTGISQ16647 500 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 GDF6Q6KF10 455 aaPredicted RBP16.31■□□□□ 0.2
DDX54-203ENST00000546869 MIER3Q7Z3K6 550 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 UIMC1Q96RL1 719 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.31■□□□□ 0.2
DDX54-203ENST00000546869 TRMT13Q9NUP7 481 aaKnown RBP16.31■□□□□ 0.2
DDX54-203ENST00000546869 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
DDX54-203ENST00000546869 IGSF9BQ9UPX0 1349 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 BACH1O14867 736 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 TIMP1P01033 207 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 RBL2Q08999 1139 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 PTK7Q13308 1070 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 BECN1Q14457 450 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 EPHA7Q15375 998 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 PRPF38BQ5VTL8 546 aaKnown RBP16.3■□□□□ 0.2
DDX54-203ENST00000546869 ATP8B4Q8TF62 1192 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
DDX54-203ENST00000546869 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
DDX54-203ENST00000546869 TTC12Q9H892 705 aaPredicted RBP16.3■□□□□ 0.2
DDX54-203ENST00000546869 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 MTMR6Q9Y217 621 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 PCDHB6Q9Y5E3 794 aa16.3■□□□□ 0.2
DDX54-203ENST00000546869 TNRC18O15417 2968 aaPredicted RBP16.29■□□□□ 0.2
DDX54-203ENST00000546869 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 POTEB3A0JP26 581 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 MBLAC1A4D2B0 266 aaPredicted RBP16.29■□□□□ 0.2
DDX54-203ENST00000546869 VPS37CA5D8V6 355 aaPredicted RBP16.29■□□□□ 0.2
DDX54-203ENST00000546869 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 HBP1O60381 514 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 ATP4AP20648 1035 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 PRPHP41219 470 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 HIC1Q14526 733 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 PDXDC2PQ6P474 469 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 POTEBQ6S5H4 581 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 SERINC5Q86VE9 423 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 CAGE1Q8TC20 777 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 FAM167AQ96KS9 214 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 NOC4LQ9BVI4 516 aaKnown RBP16.29■□□□□ 0.2
DDX54-203ENST00000546869 SETD4Q9NVD3 440 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 GABBR1Q9UBS5 961 aa16.29■□□□□ 0.2
DDX54-203ENST00000546869 COL1A2P08123 1366 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 EML1O00423 815 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 CHMP2AO43633 222 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 DKC1O60832 514 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDX54-203ENST00000546869 RPLP2P05387 115 aaKnown RBP16.28■□□□□ 0.2
DDX54-203ENST00000546869 P4HBP07237 508 aaKnown RBP16.28■□□□□ 0.2
DDX54-203ENST00000546869 INSRRP14616 1297 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 RAG1P15918 1043 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 ITGB8P26012 769 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 BMP8BP34820 402 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 TXKP42681 527 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 PSMC5P62195 406 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 PPFIA1Q13136 1202 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 BFSP2Q13515 415 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 PDIA5Q14554 519 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 ZNF484Q5JVG2 852 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 MFSD5Q6N075 450 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 RPAINQ86UA6 219 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 CCDC155Q8N6L0 562 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 GDF15Q99988 308 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 HIPK3Q9H422 1215 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 PRDM5Q9NQX1 630 aaPredicted RBP16.28■□□□□ 0.2
DDX54-203ENST00000546869 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 ZMYND8Q9ULU4 1186 aaPredicted RBP16.28■□□□□ 0.2
DDX54-203ENST00000546869 NOD1Q9Y239 953 aa16.28■□□□□ 0.2
DDX54-203ENST00000546869 CAND2O75155 1236 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 BMP15O95972 392 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 SYN1P17600 705 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 MARK3P27448 753 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.26e-12■■■■■ 48.5
DDX54-203ENST00000546869 RESTQ13127 1097 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 PTGDRQ13258 359 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 GRIK4Q16099 956 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 XKR3Q5GH77 459 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 MARCH8Q5T0T0 291 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 NEK9Q8TD19 979 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 PPP1R13LQ8WUF5 828 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 LMBR1Q8WVP7 490 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 NIFKQ9BYG3 293 aaKnown RBP16.27■□□□□ 0.2
DDX54-203ENST00000546869 CEP131Q9UPN4 1083 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
DDX54-203ENST00000546869 TREHO43280 583 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 ZNF862O60290 1169 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 STBD1O95210 358 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 LYPLA2O95372 231 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 PARNO95453 639 aaKnown RBP16.26■□□□□ 0.19
DDX54-203ENST00000546869 CYP2C9P11712 490 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms