RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 GJD3Q8N144 294 aa14.43□□□□□ -0.1
COPS7A-221ENST00000546229 NSUN3Q9H649 340 aaKnown RBP14.43□□□□□ -0.1
COPS7A-221ENST00000546229 JADE2Q9NQC1 790 aa14.43□□□□□ -0.1
COPS7A-221ENST00000546229 ERAP1Q9NZ08 941 aa14.43□□□□□ -0.1
COPS7A-221ENST00000546229 PLXNA4Q9HCM2 1894 aa14.43□□□□□ -0.1
COPS7A-221ENST00000546229 ENPP3O14638 875 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 MCM5P33992 734 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 GNAQP50148 359 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 DLX2Q07687 328 aaPredicted RBP14.42□□□□□ -0.1
COPS7A-221ENST00000546229 HYAL1Q12794 435 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 ITGB3BPQ13352 177 aaPredicted RBP14.42□□□□□ -0.1
COPS7A-221ENST00000546229 MTMR1Q13613 665 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 PTPROQ16827 1216 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 CREB3L3Q68CJ9 461 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 TSHZ1Q6ZSZ6 1077 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 RTN4RL1Q86UN2 441 aaPredicted RBP14.42□□□□□ -0.1
COPS7A-221ENST00000546229 CYP2W1Q8TAV3 490 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 DNAJB3Q8WWF6 145 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 SEPT1Q8WYJ6 367 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 CUL5Q93034 780 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 FAM122AQ96E09 287 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 CDHR1Q96JP9 859 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 LRRC2Q9BYS8 371 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 PSTPIP2Q9H939 334 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 SEC63Q9UGP8 760 aaKnown RBP14.42□□□□□ -0.1
COPS7A-221ENST00000546229 PCDHA6Q9UN73 950 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 PCDHA8Q9Y5H6 950 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 CDY2AQ9Y6F7 541 aa14.42□□□□□ -0.1
COPS7A-221ENST00000546229 TBX10O75333 385 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 DGKIO75912 1065 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 MMP1P03956 469 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 CTNNB1P35222 781 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 BMPR1AP36894 532 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 MRPS6P82932 125 aaKnown RBP14.41□□□□□ -0.1
COPS7A-221ENST00000546229 CASC1Q6TDU7 716 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 CRYGNQ8WXF5 182 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 IL17RAQ96F46 866 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 LMAN2LQ9H0V9 348 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 FNDC1Q4ZHG4 1894 aaPredicted RBP14.41□□□□□ -0.1
COPS7A-221ENST00000546229 NFASCO94856 1347 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 IGSF9BQ9UPX0 1349 aa14.41□□□□□ -0.1
COPS7A-221ENST00000546229 IGKV6D-21A0A0A0MT36 114 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 ATG7O95352 703 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 RB1P06400 928 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 CALM1P0DP23 149 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 CALM2P0DP24 149 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 CALM3P0DP25 149 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 INSRRP14616 1297 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 DNAJB1P25685 340 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 CD52P31358 61 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 CLK2P49760 499 aaKnown RBP14.4□□□□□ -0.1
COPS7A-221ENST00000546229 PUS10Q3MIT2 529 aaKnown RBP14.4□□□□□ -0.1
COPS7A-221ENST00000546229 APOA5Q6Q788 366 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 FIBCD1Q8N539 461 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 FANCBQ8NB91 859 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 TRAPPC12Q8WVT3 735 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 TMX1Q9H3N1 280 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 SMARCAD1Q9H4L7 1026 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 JPH1Q9HDC5 661 aaPredicted RBP14.4□□□□□ -0.1
COPS7A-221ENST00000546229 KCNH7Q9NS40 1196 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 FAM217BQ9NTX9 383 aaPredicted RBP14.4□□□□□ -0.1
COPS7A-221ENST00000546229 PKD2L1Q9P0L9 805 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 MRPL42Q9Y6G3 142 aaKnown RBP14.4□□□□□ -0.1
COPS7A-221ENST00000546229 SQORQ9Y6N5 450 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 KDM3AQ9Y4C1 1321 aa14.4□□□□□ -0.1
COPS7A-221ENST00000546229 CCDC69A6NI79 296 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 PRR33A8MZF0 331 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 ADAMTS3O15072 1205 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 MAFGO15525 162 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 CCNE2O96020 404 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 GTF2F1P35269 517 aaKnown RBP eCLIP14.39□□□□□ -0.11
COPS7A-221ENST00000546229 ACTR2P61160 394 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 IRX6P78412 446 aaPredicted RBP14.39□□□□□ -0.11
COPS7A-221ENST00000546229 EXOSC10Q01780 885 aaKnown RBP14.39□□□□□ -0.11
COPS7A-221ENST00000546229 PLCB4Q15147 1175 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 PPP1R18Q6NYC8 613 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 MICU3Q86XE3 530 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 TMTC2Q8N394 836 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 MXRA8Q9BRK3 442 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
COPS7A-221ENST00000546229 RIC8AQ9NPQ8 531 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 BRPF3Q9ULD4 1205 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 WDR81Q562E7 1941 aa14.39□□□□□ -0.11
COPS7A-221ENST00000546229 USP34Q70CQ2 3546 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 STXBP3O00186 592 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 LINC01565O15544 149 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 ARP10275 920 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 SREBF1P36956 1147 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 SMAD2Q15796 467 aaKnown RBP14.38□□□□□ -0.11
COPS7A-221ENST00000546229 NFXL1Q6ZNB6 911 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 HEATR3Q7Z4Q2 680 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 TEX2Q8IWB9 1127 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 CCDC82Q8N4S0 544 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 PGBD1Q96JS3 809 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 MSLNLQ96KJ4 702 aa14.38□□□□□ -0.11
COPS7A-221ENST00000546229 PLVAPQ9BX97 442 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms