RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 TRAF6Q9Y4K3 522 aa4.4□□□□□ -1.71
CUL3-215ENST00000546102 SPEF1Q9Y4P9 236 aa4.4□□□□□ -1.71
CUL3-215ENST00000546102 MYOM1P52179 1685 aa4.4□□□□□ -1.71
CUL3-215ENST00000546102 CPS1P31327 1500 aa4.4□□□□□ -1.71
CUL3-215ENST00000546102 NCANO14594 1321 aa4.4□□□□□ -1.71
CUL3-215ENST00000546102 CENPJQ9HC77 1338 aaPredicted RBP4.4□□□□□ -1.71
CUL3-215ENST00000546102 KTN1Q86UP2 1357 aaKnown RBP4.4□□□□□ -1.71
CUL3-215ENST00000546102 DISP3Q9P2K9 1392 aa4.4□□□□□ -1.71
CUL3-215ENST00000546102 TMEM2Q9UHN6 1383 aa4.4□□□□□ -1.71
CUL3-215ENST00000546102 YTHDC2Q9H6S0 1430 aaKnown RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 ARHGAP23Q9P227 1491 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 ZNF891A8MT65 544 aaPredicted RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 IFRD1O00458 451 aaPredicted RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 PRKD3O94806 890 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 CRTAMO95727 393 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 EOMESO95936 686 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 ITGA4P13612 1032 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 NTF4P34130 210 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 GFRA1P56159 465 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 IL2P60568 153 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 PPP2R5DQ14738 602 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 SART3Q15020 963 aaKnown RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 KCNA10Q16322 511 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 PRAMEF13Q5VWM6 474 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 IQSEC1Q6DN90 963 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 GTF2IRD2BQ6EKJ0 949 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 POMZP3Q6PJE2 187 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 LCNL1Q6ZST4 164 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 USP53Q70EK8 1073 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 UBE3DQ7Z6J8 389 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 GTF2IRD2Q86UP8 949 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 C1QL4Q86Z23 238 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 TPH2Q8IWU9 490 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 C7orf61Q8IZ16 206 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 NXPE1Q8N323 547 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 CRACR2BQ8N4Y2 399 aaPredicted RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 MFSD2AQ8NA29 543 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 ABHD4Q8TB40 342 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 XAGE3Q8WTP9 111 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 TIFAQ96CG3 184 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 ALPK1Q96QP1 1244 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 C14orf93Q9H972 538 aaKnown RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 GP6Q9HCN6 339 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 CGGBP1Q9UFW8 167 aaPredicted RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 LUC7L2Q9Y383 392 aaKnown RBP4.39□□□□□ -1.71
CUL3-215ENST00000546102 PCDHA9Q9Y5H5 950 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 PLEKHG1Q9ULL1 1385 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 NINLQ9Y2I6 1382 aa4.39□□□□□ -1.71
CUL3-215ENST00000546102 PTPRMP28827 1452 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 CCDC189A1A4V9 331 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 B4E1Z4 1266 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 CCER2I3L3R5 266 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 SHOXO15266 292 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 MT-CO1P00395 513 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 F2P00734 622 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 CENPBP07199 599 aaPredicted RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 SNRPB2P08579 225 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 MYBL2P10244 700 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 CCND1P24385 295 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 IARSP41252 1262 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 ADCYAP1R1P41586 468 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 MAP4K2Q12851 820 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 AUHQ13825 339 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 SLBPQ14493 270 aaKnown RBP eCLIP4.38□□□□□ -1.71
CUL3-215ENST00000546102 ZRSR2Q15696 482 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 PRSS53Q2L4Q9 553 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 LONRF3Q496Y0 759 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 ANKRD39Q53RE8 183 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 NBPF12Q5TAG4 269 aaPredicted RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 IL31Q6EBC2 164 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 CXorf57Q6NSI4 855 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 ZCCHC8Q6NZY4 707 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 ATG14Q6ZNE5 492 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 MAMDC2Q7Z304 686 aaPredicted RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 THAP5Q7Z6K1 395 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 CILP2Q8IUL8 1156 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 ARHGEF39Q8N4T4 335 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 TMEM145Q8NBT3 493 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 KCNN1Q92952 543 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 SYTL4Q96C24 671 aaPredicted RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 RCC1LQ96I51 464 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 COX4I2Q96KJ9 171 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 GPR101Q96P66 508 aaPredicted RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 TESK2Q96S53 571 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 MIPEPQ99797 713 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 NOL6Q9H6R4 1146 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 SEMA3GQ9NS98 782 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 SAMD15Q9P1V8 674 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 FBXL21Q9UKT6 434 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 INTUQ9ULD6 942 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 LRPPRCP42704 1394 aaKnown RBP4.38□□□□□ -1.71
CUL3-215ENST00000546102 TECPR2O15040 1411 aa4.38□□□□□ -1.71
CUL3-215ENST00000546102 TULP4Q9NRJ4 1543 aa4.37□□□□□ -1.71
CUL3-215ENST00000546102 ADGRB2O60241 1585 aa4.37□□□□□ -1.71
CUL3-215ENST00000546102 USP32Q8NFA0 1604 aa4.37□□□□□ -1.71
CUL3-215ENST00000546102 NUAK1O60285 661 aa4.37□□□□□ -1.71
CUL3-215ENST00000546102 WDHD1O75717 1129 aaPredicted RBP4.37□□□□□ -1.71
CUL3-215ENST00000546102 GLRX3O76003 335 aaKnown RBP4.37□□□□□ -1.71
CUL3-215ENST00000546102 SNUPNO95149 360 aaKnown RBP4.37□□□□□ -1.71
CUL3-215ENST00000546102 FKBP9O95302 570 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms