RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SARNPP82979 210 aaKnown RBP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 ARHGAP4P98171 946 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 LMBRD2Q68DH5 695 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 CDC42EP5Q6NZY7 148 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 AMNQ9BXJ7 453 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 VIPAS39Q9H9C1 493 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 LRRC4BQ9NT99 713 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 CAPN7Q9Y6W3 813 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 ADAMTSL3P82987 1691 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 PNMA6FA0A0J9YX94 578 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 GOLGA6L7A0A1B0GV03 622 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 TMEM150BA6NC51 233 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 K7ENM7 598 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 CASP4P49662 377 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 GRB10Q13322 594 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 DLGAP5Q15398 846 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 KRT71Q3SY84 523 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 FBXW10Q5XX13 1052 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 CCDC114Q96M63 670 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 FAM118BQ9BPY3 351 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 THAP9Q9H5L6 903 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 HP1BP3Q5SSJ5 553 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 TTI2Q6NXR4 508 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 WDR59Q6PJI9 974 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 ARMCX6Q7L4S7 300 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 GLYCTKQ8IVS8 523 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 RAD54LQ92698 747 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 THOC1Q96FV9 657 aaKnown RBP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 TSGA10Q9BZW7 698 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 LRRC27Q9C0I9 530 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 RBM12Q9NTZ6 932 aaKnown RBP10.7□□□□□ -0.7
TRAF1-203ENST00000546084 ATP8A1Q9Y2Q0 1164 aa10.7□□□□□ -0.7
TRAF1-203ENST00000546084 AFF2P51816 1311 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 DDTLA6NHG4 134 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 TTLL12Q14166 644 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 TNIP1Q15025 636 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 CEP57Q86XR8 500 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 SPATA4Q8NEY3 305 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 DUSP9Q99956 384 aaKnown RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 KCNK9Q9NPC2 374 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 ZNF277Q9NRM2 450 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 C5P01031 1676 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 ZBTB5O15062 677 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 KLRC1P26715 233 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 GCLMP48507 274 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 ALKBH5Q6P6C2 394 aaKnown RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 UNC13DQ70J99 1090 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 IRF2BP1Q8IU81 584 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 OSBPL9Q96SU4 736 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 RTFDC1Q9BY42 306 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 SPATA31A5Q5VU36 1347 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 SPATA31A7Q8IWB4 1347 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 BBOX1O75936 387 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 BMP3P12645 472 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 CTNNA1P35221 906 aaKnown RBP10.69□□□□□ -0.7
TRAF1-203ENST00000546084 STAT1P42224 750 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 NPY5RQ15761 445 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 ASPRV1Q53RT3 343 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 ACER1Q8TDN7 264 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 DYDC2Q96IM9 177 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 TMOD4Q9NZQ9 345 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 ARHGAP20Q9P2F6 1191 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
TRAF1-203ENST00000546084 A0A087X0T9 212 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 PALM3A6NDB9 673 aaPredicted RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 ATMINO43313 823 aaPredicted RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 FAM228BP0C875 321 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 RPL13P26373 211 aaKnown RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 RDXP35241 583 aaKnown RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 CARSP49589 748 aaKnown RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 TRADDQ15628 312 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 SLC35G1Q2M3R5 365 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 PAPD7Q5XG87 772 aaKnown RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 CPLX4Q7Z7G2 160 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 CCDC170Q8IYT3 715 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 DNAJC7Q99615 494 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 ABCB11O95342 1321 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 A0A1W2PQC6 194 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 TARSL2A2RTX5 802 aaKnown RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 FLOT1O75955 427 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 RHOBTB3O94955 611 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 PLTPP55058 493 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 CETN1Q12798 172 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 DGKZQ13574 1117 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 OTUD6AQ7L8S5 288 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 SCLT1Q96NL6 688 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 SNX12Q9UMY4 172 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 CALCAP01258 141 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 H2AFZP0C0S5 128 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 SRGNP10124 158 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 RCAN1P53805 252 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 NNTQ13423 1086 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms