RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 USP17L5A8MUK1 530 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 CETN3O15182 167 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 ZBTB48P10074 688 aaPredicted RBP9.58□□□□□ -0.88
TDP1-204ENST00000545686 SMTNP53814 917 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 HSPA2P54652 639 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 HDLBPQ00341 1268 aaKnown RBP9.58□□□□□ -0.88
TDP1-204ENST00000545686 HLTFQ14527 1009 aaKnown RBP eCLIP9.58□□□□□ -0.88
TDP1-204ENST00000545686 FRMD5Q7Z6J6 570 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 NBPF5PQ86XG9 351 aaPredicted RBP9.58□□□□□ -0.88
TDP1-204ENST00000545686 RASGEF1CQ8N431 466 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 LMBR1Q8WVP7 490 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 SEC14L1Q92503 715 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 P3H4Q92791 437 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 PACSIN1Q9BY11 444 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 VAT1LQ9HCJ6 419 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 NENFQ9UMX5 172 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 E7EVH7 732 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 FLOT1O75955 427 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 TM4SF1P30408 202 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 BTDP43251 543 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 TNNI2P48788 182 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 NPEPPSP55786 919 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 ZNF844Q08AG5 666 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 UAP1Q16222 522 aaPredicted RBP9.58□□□□□ -0.88
TDP1-204ENST00000545686 ECM1Q16610 540 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 IRF2BP2Q7Z5L9 587 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 SLFN11Q7Z7L1 901 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 GPIHBP1Q8IV16 184 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 KLHL7Q8IXQ5 586 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 TEX11Q8IYF3 940 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 SYCE1Q8N0S2 351 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 SCFD1Q8WVM8 642 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 HAS1Q92839 578 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 CUL5Q93034 780 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 CYFIP2Q96F07 1278 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 MXD3Q9BW11 206 aa9.58□□□□□ -0.88
TDP1-204ENST00000545686 SUCLA2Q9P2R7 463 aaPredicted RBP9.58□□□□□ -0.88
TDP1-204ENST00000545686 PACSIN2Q9UNF0 486 aaPredicted RBP9.58□□□□□ -0.88
TDP1-204ENST00000545686 ZNF335Q9H4Z2 1342 aaPredicted RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 PNMA6FA0A0J9YX94 578 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 GMNCA6NCL1 334 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 C5orf60A6NFR6 353 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 TRAPPC3O43617 180 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 GFPT2O94808 682 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 CTNNA1P35221 906 aaKnown RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 DNA2P51530 1060 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 PTK2Q05397 1052 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 KCNH2Q12809 1159 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 DPY19L2P1Q6NXN4 242 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 TPTE2Q6XPS3 522 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 BICDL1Q6ZP65 573 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 VPS36Q86VN1 386 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 TAX1BP1Q86VP1 789 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 GLT8D2Q9H1C3 349 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 EMILIN3Q9NT22 766 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 NAGPAQ9UK23 515 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 PCDHA12Q9UN75 941 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 TRAF3IP3Q9Y228 551 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 NOC2LQ9Y3T9 749 aaKnown RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 GOLGA6L7A0A1B0GV03 622 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 CEP104O60308 925 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 PLA2G4BP0C869 781 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 ERCC3P19447 782 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 MRPL12P52815 198 aaKnown RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 PPP2R2AP63151 447 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 ADAM9Q13443 819 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 ZNF571Q7Z3V5 609 aaPredicted RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 GPBP1Q86WP2 473 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 CCDC13Q8IYE1 715 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 TPCN2Q8NHX9 752 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 CCDC26Q8TAB7 109 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 COA7Q96BR5 231 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 FAM163AQ96GL9 167 aaPredicted RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 UBA5Q9GZZ9 404 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 FAM114A2Q9NRY5 505 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 HDAC9Q9UKV0 1011 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 TTC7AQ9ULT0 858 aaPredicted RBP9.57□□□□□ -0.88
TDP1-204ENST00000545686 BTAF1O14981 1849 aa9.57□□□□□ -0.88
TDP1-204ENST00000545686 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 MYO1FO00160 1098 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 CHUKO15111 745 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 SART1O43290 800 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 UCHL3P15374 230 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 CDR1P51861 262 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 SEC24CP53992 1094 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 EIF3BP55884 814 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 ARID5AQ03989 594 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 TRADDQ15628 312 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 GRIK5Q16478 980 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 PPP2R5EQ16537 467 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 HERC4Q5GLZ8 1057 aaPredicted RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 CCDC121Q6ZUS5 278 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 SPAG5Q96R06 1193 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 FGFBP2Q9BYJ0 223 aa9.56□□□□□ -0.88
TDP1-204ENST00000545686 CNOT10Q9H9A5 744 aaKnown RBP9.56□□□□□ -0.88
TDP1-204ENST00000545686 MTMR4Q9NYA4 1195 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms