RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 SPATA31C2B4DYI2 1134 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 TBX3O15119 743 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
LTBR-214ENST00000545445 EDIL3O43854 480 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 TLL1O43897 1013 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 B4GALT4O60513 344 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 NEMFO60524 1076 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 RGS20O76081 388 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 PSMC6P62333 389 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 ITGA7Q13683 1181 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 PKP1Q13835 747 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 PRR16Q569H4 304 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 TAPT1Q6NXT6 567 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 EEPD1Q7L9B9 569 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 ALYREFQ86V81 257 aaKnown RBP13.39□□□□□ -0.27
LTBR-214ENST00000545445 FBXO16Q8IX29 292 aaPredicted RBP13.39□□□□□ -0.27
LTBR-214ENST00000545445 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
LTBR-214ENST00000545445 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 ZDHHC9Q9Y397 364 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
LTBR-214ENST00000545445 LAD1O00515 517 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 ARHGEF15O94989 841 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
LTBR-214ENST00000545445 TDP2O95551 362 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 ATP2B1P20020 1258 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 TOB1P50616 345 aaPredicted RBP13.38□□□□□ -0.27
LTBR-214ENST00000545445 NKX3-2P78367 333 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 NEDD9Q14511 834 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 FSCN1Q16658 493 aaKnown RBP13.38□□□□□ -0.27
LTBR-214ENST00000545445 CCDC62Q6P9F0 684 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 TLK2Q86UE8 772 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 ARNTL2Q8WYA1 636 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 LENG9Q96B70 501 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 KCNH7Q9NS40 1196 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 COG5Q9UP83 839 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 Q9Y3F1 56 aa13.38□□□□□ -0.27
LTBR-214ENST00000545445 DDX49Q9Y6V7 483 aaKnown RBP13.38□□□□□ -0.27
LTBR-214ENST00000545445 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 MARCH6O60337 910 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 GPR37L1O60883 481 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 CABYRO75952 493 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 POU3F3P20264 500 aaPredicted RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 MCM7P33993 719 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 DUSP28Q4G0W2 176 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 FOXD4L5Q5VV16 416 aaPredicted RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 DEFB128Q7Z7B8 93 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 FOXD4L4Q8WXT5 416 aaPredicted RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 RIT2Q99578 217 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 AGO4Q9HCK5 861 aaKnown RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 KCNMB3Q9NPA1 279 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 DDX41Q9UJV9 622 aaKnown RBP13.37□□□□□ -0.27
LTBR-214ENST00000545445 CFAP45Q9UL16 551 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 NFASCO94856 1347 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 MUC6Q6W4X9 2439 aa13.37□□□□□ -0.27
LTBR-214ENST00000545445 IPO5O00410 1097 aaKnown RBP13.36□□□□□ -0.27
LTBR-214ENST00000545445 ARP10275 920 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 SEMA3FQ13275 785 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 LAMC2Q13753 1193 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 ZNF174Q15697 407 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 CALCRLQ16602 461 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 SPRED2Q7Z698 418 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 HLA-CQ95604 372 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 EMID1Q96A84 441 aaPredicted RBP13.36□□□□□ -0.27
LTBR-214ENST00000545445 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
LTBR-214ENST00000545445 SDF4Q9BRK5 362 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 AP5M1Q9H0R1 490 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 CD320Q9NPF0 282 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 PDGFCQ9NRA1 345 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 POLR3EQ9NVU0 708 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 TCEAL9Q9UHQ7 104 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 GNEQ9Y223 722 aaKnown RBP13.36□□□□□ -0.27
LTBR-214ENST00000545445 PCDHB6Q9Y5E3 794 aa13.36□□□□□ -0.27
LTBR-214ENST00000545445 MORC2Q9Y6X9 1032 aaPredicted RBP13.36□□□□□ -0.27
LTBR-214ENST00000545445 MSH4O15457 936 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 DYNC1LI2O43237 492 aaPredicted RBP13.35□□□□□ -0.27
LTBR-214ENST00000545445 SLC37A4O43826 429 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 GH1P01241 217 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 CYP2C9P11712 490 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 KCNA2P16389 499 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 SMPD1P17405 629 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 PRPHP41219 470 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 TAP1Q03518 808 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 GRB10Q13322 594 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 LY6KQ17RY6 165 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 CELF3Q5SZQ8 465 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms