RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 COL12A1Q99715 3063 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 FBN2P35556 2912 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 FAM170BA6NMN3 283 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 ENPP3O14638 875 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 HYAL3O43820 417 aaPredicted RBP8.26□□□□□ -1.09
CIT-215ENST00000544800 CASTP20810 708 aaKnown RBP8.26□□□□□ -1.09
CIT-215ENST00000544800 USP5P45974 858 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
CIT-215ENST00000544800 GABPAQ06546 454 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 PDE4BQ07343 736 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 TRIM26Q12899 539 aaPredicted RBP8.26□□□□□ -1.09
CIT-215ENST00000544800 PPP2R5BQ15173 497 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 SH3PXD2AQ5TCZ1 1133 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 PLPP4Q5VZY2 271 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 CCDC149Q6ZUS6 474 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 RASGRP2Q7LDG7 609 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 SERINC5Q86VE9 423 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
CIT-215ENST00000544800 SRCIN1Q9C0H9 1055 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 SLC38A10Q9HBR0 1119 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 SLC2A4RGQ9NR83 387 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 HOMER2Q9NSB8 354 aa8.26□□□□□ -1.09
CIT-215ENST00000544800 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.26□□□□□ -1.09
CIT-215ENST00000544800 FRMPD2Q68DX3 1309 aaPredicted RBP8.26□□□□□ -1.09
CIT-215ENST00000544800 RALGAPA1Q6GYQ0 2036 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 HIDE1A8MVS5 230 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 CAND2O75155 1236 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 CIAO1O76071 339 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 FGF18O76093 207 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 RFX5P48382 616 aaPredicted RBP8.25□□□□□ -1.09
CIT-215ENST00000544800 TIMM10P62072 90 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 PPP2R5DQ14738 602 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 MVPQ14764 893 aaKnown RBP8.25□□□□□ -1.09
CIT-215ENST00000544800 ADGRA1Q86SQ6 560 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 CCDC146Q8IYE0 955 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 C12orf76Q8N812 135 aaPredicted RBP8.25□□□□□ -1.09
CIT-215ENST00000544800 SPRYD3Q8NCJ5 442 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 DDX23Q9BUQ8 820 aaKnown RBP8.25□□□□□ -1.09
CIT-215ENST00000544800 OSBPL7Q9BZF2 842 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 DZANK1Q9NVP4 752 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 PUF60Q9UHX1 559 aaKnown RBP8.25□□□□□ -1.09
CIT-215ENST00000544800 KLK13Q9UKR3 277 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 LZTS1Q9Y250 596 aa8.25□□□□□ -1.09
CIT-215ENST00000544800 APC2O95996 2303 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 LOC102724159A0A0B4J2E5 919 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 F5H6K3 240 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 NCAM2O15394 837 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 RAD21O60216 631 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 TDGF1P13385 188 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 CSRP1P21291 193 aaKnown RBP8.24□□□□□ -1.09
CIT-215ENST00000544800 CNR2P34972 360 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 RPS9P46781 194 aaKnown RBP8.24□□□□□ -1.09
CIT-215ENST00000544800 PSEN2P49810 448 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 UBXN2BQ14CS0 331 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 PWP2Q15269 919 aaKnown RBP8.24□□□□□ -1.09
CIT-215ENST00000544800 TWISTNBQ3B726 338 aaPredicted RBP8.24□□□□□ -1.09
CIT-215ENST00000544800 ZBTB41Q5SVQ8 909 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 RNF43Q68DV7 783 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 KIAA1211LQ6NV74 962 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 PI16Q6UXB8 463 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 CERS3Q8IU89 383 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 CLEC10AQ8IUN9 316 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 ZNF513Q8N8E2 541 aaPredicted RBP8.24□□□□□ -1.09
CIT-215ENST00000544800 SCFD2Q8WU76 684 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 COPS5Q92905 334 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 CLDN23Q96B33 292 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 TCF25Q9BQ70 676 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 ALG1Q9BT22 464 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 KATNAL1Q9BW62 490 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 MTF2Q9Y483 593 aaPredicted RBP8.24□□□□□ -1.09
CIT-215ENST00000544800 TICRRQ7Z2Z1 1910 aa8.24□□□□□ -1.09
CIT-215ENST00000544800 CELSR3Q9NYQ7 3312 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 PTPRQQ9UMZ3 2332 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 POLR3DP05423 398 aaPredicted RBP8.23□□□□□ -1.09
CIT-215ENST00000544800 TXNP10599 105 aaKnown RBP8.23□□□□□ -1.09
CIT-215ENST00000544800 EEF2P13639 858 aaKnown RBP8.23□□□□□ -1.09
CIT-215ENST00000544800 DYNLL1P63167 89 aaKnown RBP8.23□□□□□ -1.09
CIT-215ENST00000544800 APOBRQ0VD83 1088 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 PAN2Q504Q3 1202 aaKnown RBP8.23□□□□□ -1.09
CIT-215ENST00000544800 DAB2IPQ5VWQ8 1189 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 KANK3Q6NY19 840 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 DHX37Q8IY37 1157 aaKnown RBP8.23□□□□□ -1.09
CIT-215ENST00000544800 THNSL1Q8IYQ7 743 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 MYADMQ96S97 322 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 NELL2Q99435 816 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 ENTPD7Q9NQZ7 604 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 CYP39A1Q9NYL5 469 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 ADD3Q9UEY8 706 aaKnown RBP8.23□□□□□ -1.09
CIT-215ENST00000544800 FBN3Q75N90 2809 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 IL16Q14005 1332 aa8.23□□□□□ -1.09
CIT-215ENST00000544800 URB1O60287 2271 aaKnown RBP8.22□□□□□ -1.09
CIT-215ENST00000544800 HAS3O00219 553 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 CAPN9O14815 690 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 HRO43593 1189 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 IGSF3O75054 1194 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 WISP1O95388 367 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 FDX1P10109 184 aa8.22□□□□□ -1.09
CIT-215ENST00000544800 IL15P40933 162 aaPredicted RBP8.22□□□□□ -1.09
CIT-215ENST00000544800 PRKCQQ04759 706 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms