RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ENC1O14682 589 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 PRR23D2P0DMB1 279 aaPredicted RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 CDC25BP30305 580 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ABCD1P33897 745 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 PLEKHM3Q6ZWE6 761 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 TTC30BQ8N4P2 665 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ANKRD13CQ8N6S4 541 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 FANCLQ9NW38 375 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 MOSPD1Q9UJG1 213 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ARHGAP26Q9UNA1 814 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 APOBEC2Q9Y235 224 aaKnown RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 NPATQ14207 1427 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ZSCAN20P17040 1043 aaPredicted RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 TRPC1P48995 793 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ADCY2Q08462 1091 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 TRIP13Q15645 432 aaPredicted RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 HIBCHQ6NVY1 386 aaPredicted RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 B4GALNT2Q8NHY0 566 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 NEK9Q8TD19 979 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ZMYND12Q9H0C1 365 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 CMA1P23946 247 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ALDH1B1P30837 517 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ZAP70P43403 619 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 ZSCAN9O15535 394 aaPredicted RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 DDAH1O94760 285 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 CASP14P31944 242 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
PCDH9-204ENST00000544246 PYROXD1Q8WU10 500 aa11.17□□□□□ -0.62
PCDH9-204ENST00000544246 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 ZBED1O96006 694 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 MECOMQ03112 1051 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 MYO1EQ12965 1108 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 SCG3Q8WXD2 468 aaKnown RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 SYMPKQ92797 1274 aaKnown RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 PHF21AQ96BD5 680 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 EDEM3Q9BZQ6 932 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 JCADQ9P266 1359 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 GYG2O15488 501 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 CHGBP05060 677 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 LBRQ14739 615 aaKnown RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 BBS9Q3SYG4 887 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 C10orf76Q5T2E6 689 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 ZNF274Q96GC6 653 aaPredicted RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 KMT5AQ9NQR1 393 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 RNF14Q9UBS8 474 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 ZNF229Q9UJW7 825 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 CIITAP33076 1130 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 DR1Q01658 176 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 TJAP1Q5JTD0 557 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 WDR75Q8IWA0 830 aaKnown RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 TSPYL6Q8N831 410 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 OTUB1Q96FW1 271 aaPredicted RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 TUBGCP2Q9BSJ2 902 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 GTSE1Q9NYZ3 720 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 ATP5HO75947 161 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 SCG2P13521 617 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 NR1D1P20393 614 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 FAF2Q96CS3 445 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 AP5M1Q9H0R1 490 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 PPARGC1AQ9UBK2 798 aaKnown RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 BNIP3LO60238 219 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 DNAJC6O75061 913 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 SERPINB10P48595 397 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 KRT39Q6A163 491 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 C1orf228Q6PIY5 440 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 TBC1D1Q86TI0 1168 aaPredicted RBP11.16□□□□□ -0.62
PCDH9-204ENST00000544246 CATSPER3Q86XQ3 398 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 CUEDC2Q9H467 287 aa11.16□□□□□ -0.62
PCDH9-204ENST00000544246 A0A0G2JND7 137 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 ARHGAP10A1A4S6 786 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 H0YC42 278 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 COPEO14579 308 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 PPIP5K2O43314 1243 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 TMPRSS15P98073 1019 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 CEP55Q53EZ4 464 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 SMYD3Q9H7B4 428 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 ERVK-7P63135 1459 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 PREX2Q70Z35 1606 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 HSPA1AP0DMV8 641 aaKnown RBP11.15□□□□□ -0.62
PCDH9-204ENST00000544246 HSPA1BP0DMV9 641 aaKnown RBP11.15□□□□□ -0.62
PCDH9-204ENST00000544246 CA4P22748 312 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 C1orf146Q5VVC0 180 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 UNC5CLQ8IV45 518 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 OLFM3Q96PB7 478 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 TNNQ9UQP3 1299 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 ZMYND10O75800 440 aa11.15□□□□□ -0.62
PCDH9-204ENST00000544246 NR2F2P24468 414 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms