RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 PSMD10O75832 226 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 STAT5BP51692 787 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 RBL2Q08999 1139 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 C16orf59Q7L2K0 433 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 PLPPR4Q7Z2D5 763 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 SMAP1Q8IYB5 467 aaPredicted RBP24.64■■□□□ 1.54
OTUB1-212ENST00000543988 TEKT3Q9BXF9 490 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 UNC45AQ9H3U1 944 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 KCNMB3Q9NPA1 279 aa24.64■■□□□ 1.54
OTUB1-212ENST00000543988 WDR64B1ANS9 1081 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 CHMP2AO43633 222 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 ACRP10323 421 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 PLCB4Q15147 1175 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 GRIK4Q16099 956 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 FAM160B1Q5W0V3 765 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 RETREG2Q8NC44 543 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 AFAP1L1Q8TED9 768 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 VWCEQ96DN2 955 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 NAP1L4Q99733 375 aaKnown RBP24.63■■□□□ 1.53
OTUB1-212ENST00000543988 IL23AQ9NPF7 189 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 TRPC6Q9Y210 931 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 LAMA3Q16787 3333 aa24.63■■□□□ 1.53
OTUB1-212ENST00000543988 NRCAMQ92823 1304 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 WNT7AO00755 349 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 GNAT1P11488 350 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 ADAM17P78536 824 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 SWSAP1Q6NVH7 229 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 POTEDQ86YR6 584 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.62■■□□□ 1.532e-8■□□□□ 9.5
OTUB1-212ENST00000543988 ZNF302Q9NR11 478 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 PCDHA10Q9Y5I2 948 aa24.62■■□□□ 1.53
OTUB1-212ENST00000543988 SOX1O00570 391 aaPredicted RBP24.61■■□□□ 1.53
OTUB1-212ENST00000543988 PSAPP07602 524 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 IQCF3P0C7M6 154 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 CKBP12277 381 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 INSRRP14616 1297 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 SELPP16109 830 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 FXR1P51114 621 aaKnown RBP eCLIP24.61■■□□□ 1.53
OTUB1-212ENST00000543988 TMEM240Q5SV17 173 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 PDXDC2PQ6P474 469 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 LRRC8DQ7L1W4 858 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 FOXP1Q9H334 677 aaPredicted RBP24.61■■□□□ 1.53
OTUB1-212ENST00000543988 DISC1Q9NRI5 854 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 KIF3AQ9Y496 699 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 SAMM50Q9Y512 469 aa24.61■■□□□ 1.53
OTUB1-212ENST00000543988 KIF28PB7ZC32 967 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 GJB2P29033 226 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 SLC26A2P50443 739 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 IGBP1P78318 339 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 PSRC1Q6PGN9 363 aaPredicted RBP24.6■■□□□ 1.53
OTUB1-212ENST00000543988 TRAF7Q6Q0C0 670 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 B3GNT9Q6UX72 402 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 ATP8B4Q8TF62 1192 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 HAS1Q92839 578 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 RNPC3Q96LT9 517 aaKnown RBP24.6■■□□□ 1.53
OTUB1-212ENST00000543988 VAV3Q9UKW4 847 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 IGSF9BQ9UPX0 1349 aa24.6■■□□□ 1.53
OTUB1-212ENST00000543988 POTEB3A0JP26 581 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 SFNP31947 248 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 THPOP40225 353 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 JAK3P52333 1124 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 LRIT3Q3SXY7 679 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 MARCH8Q5T0T0 291 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 ZNF618Q5T7W0 954 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 POTEBQ6S5H4 581 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 RUFY4Q6ZNE9 571 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 ZNF365Q70YC5 407 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 DEFB128Q7Z7B8 93 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 TRAPPC12Q8WVT3 735 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 ZBTB10Q96DT7 871 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 FAM20AQ96MK3 541 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 GABBR1Q9UBS5 961 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 TUBE1Q9UJT0 475 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 SMC3Q9UQE7 1217 aa24.59■■□□□ 1.53
OTUB1-212ENST00000543988 MAFBQ9Y5Q3 323 aaPredicted RBP24.59■■□□□ 1.53
OTUB1-212ENST00000543988 MBLAC1A4D2B0 266 aaPredicted RBP24.58■■□□□ 1.53
OTUB1-212ENST00000543988 RBAK-RBAKDNI3L0D1 243 aa24.58■■□□□ 1.53
OTUB1-212ENST00000543988 ATP4AP20648 1035 aa24.58■■□□□ 1.53
OTUB1-212ENST00000543988 RFC2P35250 354 aa24.58■■□□□ 1.53
OTUB1-212ENST00000543988 CUL4AQ13619 759 aa24.58■■□□□ 1.53
OTUB1-212ENST00000543988 UGCGQ16739 394 aa24.58■■□□□ 1.53
OTUB1-212ENST00000543988 MIER3Q7Z3K6 550 aa24.58■■□□□ 1.53
OTUB1-212ENST00000543988 NOSTRINQ8IVI9 506 aa24.58■■□□□ 1.53
OTUB1-212ENST00000543988 TANC1Q9C0D5 1861 aa24.58■■□□□ 1.52
OTUB1-212ENST00000543988 TBX3O15119 743 aa24.57■■□□□ 1.52
OTUB1-212ENST00000543988 ATP2B1P20020 1258 aa24.57■■□□□ 1.52
OTUB1-212ENST00000543988 GNL2Q13823 731 aaKnown RBP24.57■■□□□ 1.52
OTUB1-212ENST00000543988 GPNMBQ14956 572 aa24.57■■□□□ 1.52
OTUB1-212ENST00000543988 RDM1Q8NG50 284 aa24.57■■□□□ 1.52
OTUB1-212ENST00000543988 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.57■■□□□ 1.52
OTUB1-212ENST00000543988 RRN3P2A6NIE6 340 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 ZNF862O60290 1169 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 NEMFO60524 1076 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 PFKMP08237 780 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 CTSHP09668 335 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 PPP2R5CQ13362 524 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 MBTPS1Q14703 1052 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 CKAP2LQ8IYA6 745 aa24.56■■□□□ 1.52
OTUB1-212ENST00000543988 RPUSD2Q8IZ73 545 aaKnown RBP24.56■■□□□ 1.52
OTUB1-212ENST00000543988 ZBTB42B2RXF5 422 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms