RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 FDX1P10109 184 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 BACE1P56817 501 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 ADAM9Q13443 819 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 KNOP1Q1ED39 458 aaKnown RBP18.85■□□□□ 0.61
PTPRO-209ENST00000543886 PCNX4Q63HM2 1172 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 EPM2AIP1Q7L775 607 aaPredicted RBP18.85■□□□□ 0.61
PTPRO-209ENST00000543886 ZC3H3Q8IXZ2 948 aaKnown RBP18.85■□□□□ 0.61
PTPRO-209ENST00000543886 ZNF112Q9UJU3 913 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 IPO7O95373 1038 aaKnown RBP18.84■□□□□ 0.61
PTPRO-209ENST00000543886 MYBP10242 640 aa18.84■□□□□ 0.61
PTPRO-209ENST00000543886 MARSP56192 900 aaKnown RBP18.84■□□□□ 0.61
PTPRO-209ENST00000543886 KRT83P78385 493 aa18.84■□□□□ 0.61
PTPRO-209ENST00000543886 ZNF569Q5MCW4 686 aa18.84■□□□□ 0.61
PTPRO-209ENST00000543886 ZNF280CQ8ND82 737 aa18.84■□□□□ 0.61
PTPRO-209ENST00000543886 IL31RAQ8NI17 732 aa18.84■□□□□ 0.61
PTPRO-209ENST00000543886 NEK9Q8TD19 979 aa18.84■□□□□ 0.61
PTPRO-209ENST00000543886 SYTL5Q8TDW5 730 aaPredicted RBP18.84■□□□□ 0.61
PTPRO-209ENST00000543886 ZKSCAN4Q969J2 545 aaPredicted RBP18.84■□□□□ 0.61
PTPRO-209ENST00000543886 KCNH7Q9NS40 1196 aa18.84■□□□□ 0.61
PTPRO-209ENST00000543886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.84■□□□□ 0.61
PTPRO-209ENST00000543886 DDX39AO00148 427 aaKnown RBP18.83■□□□□ 0.61
PTPRO-209ENST00000543886 CALUO43852 315 aaPredicted RBP18.83■□□□□ 0.61
PTPRO-209ENST00000543886 GCNT3O95395 438 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 PTPRAP18433 802 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 NR2F2P24468 414 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 CDK17Q00537 523 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 CCDC170Q8IYT3 715 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 NEK11Q8NG66 645 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 TRPM4Q8TD43 1214 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 PKD2L1Q9P0L9 805 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 TRAF3IP3Q9Y228 551 aa18.83■□□□□ 0.61
PTPRO-209ENST00000543886 PRPF6O94906 941 aaKnown RBP18.83■□□□□ 0.6
PTPRO-209ENST00000543886 ARHGAP25P42331 645 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 ELF2Q15723 593 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 BMT2Q1RMZ1 405 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 PRAMEF18Q5VWM3 479 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 B3GNT9Q6UX72 402 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 C1orf186Q6ZWK4 172 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 MIER3Q7Z3K6 550 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 TRIM59Q8IWR1 403 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 TRERF1Q96PN7 1200 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 LXNQ9BS40 222 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 NHEJ1Q9H9Q4 299 aaPredicted RBP18.83■□□□□ 0.6
PTPRO-209ENST00000543886 OLFML3Q9NRN5 406 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 GPRC5DQ9NZD1 345 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 CGNQ9P2M7 1197 aaKnown RBP18.83■□□□□ 0.6
PTPRO-209ENST00000543886 MYO1AQ9UBC5 1043 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 FAM184BQ9ULE4 1060 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 REXO2Q9Y3B8 237 aaKnown RBP18.83■□□□□ 0.6
PTPRO-209ENST00000543886 LOXHD1Q8IVV2 1947 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 FRMPD4Q14CM0 1322 aa18.83■□□□□ 0.6
PTPRO-209ENST00000543886 PARP14Q460N5 1801 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 VWA5AO00534 786 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 PDXKO00764 312 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 EPS15P42566 896 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 RPS6P62753 249 aaKnown RBP18.82■□□□□ 0.6
PTPRO-209ENST00000543886 TKFCQ3LXA3 575 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 MYCT1Q8N699 235 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 ATG4CQ96DT6 458 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 GGA3Q9NZ52 723 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 KCND2Q9NZV8 630 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 UBIAD1Q9Y5Z9 338 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 MRFAP1Q9Y605 127 aa18.82■□□□□ 0.6
PTPRO-209ENST00000543886 EPHB6O15197 1021 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 EIF2AK2P19525 551 aaKnown RBP18.81■□□□□ 0.6
PTPRO-209ENST00000543886 MTMR1Q13613 665 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 RNF207Q6ZRF8 634 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 KIAA1328Q86T90 577 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 LRRN4CLQ8ND94 238 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 BANK1Q8NDB2 785 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
PTPRO-209ENST00000543886 CARD6Q9BX69 1037 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 PARVGQ9HBI0 331 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 AGO4Q9HCK5 861 aaKnown RBP18.81■□□□□ 0.6
PTPRO-209ENST00000543886 JADE2Q9NQC1 790 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 TYW1Q9NV66 732 aaKnown RBP18.81■□□□□ 0.6
PTPRO-209ENST00000543886 ZBTB39O15060 712 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 HNRNPH3P31942 346 aaKnown RBP18.81■□□□□ 0.6
PTPRO-209ENST00000543886 CACNA2D4Q7Z3S7 1137 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 EDEM3Q9BZQ6 932 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 HAUS4Q9H6D7 363 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 WRAP73Q9P2S5 460 aaPredicted RBP18.81■□□□□ 0.6
PTPRO-209ENST00000543886 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 PPP2R3BQ9Y5P8 575 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 ZHX2Q9Y6X8 837 aa18.81■□□□□ 0.6
PTPRO-209ENST00000543886 CTAGE9A4FU28 777 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 ARHGEF35A5YM69 484 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 SFI1A8K8P3 1242 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 EIF3CLB5ME19 914 aaKnown RBP18.8■□□□□ 0.6
PTPRO-209ENST00000543886 EIF3DO15371 548 aaKnown RBP eCLIP18.8■□□□□ 0.6
PTPRO-209ENST00000543886 RPL13P26373 211 aaKnown RBP18.8■□□□□ 0.6
PTPRO-209ENST00000543886 HOXD13P35453 343 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 HMGCS2P54868 508 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 PGM5Q15124 567 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 NSMFQ6X4W1 530 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 RRAGAQ7L523 313 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 GPC2Q8N158 579 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 CCDC155Q8N6L0 562 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms