RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PLTPP55058 493 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 PPP2R5BQ15173 497 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 NAF1Q96HR8 494 aaKnown RBP13.8□□□□□ -0.2
SMG8-202ENST00000543872 SPDYE3A6NKU9 549 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 MSH2P43246 934 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 CNNM4Q6P4Q7 775 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMG8-202ENST00000543872 EZH1Q92800 747 aaPredicted RBP13.8□□□□□ -0.2
SMG8-202ENST00000543872 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 NSRP1Q9H0G5 558 aaKnown RBP13.8□□□□□ -0.2
SMG8-202ENST00000543872 PIDD1Q9HB75 910 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 FGFR1OP2Q9NVK5 253 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 PCDHGC5Q9Y5F6 944 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 SPEF2Q9C093 1822 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
SMG8-202ENST00000543872 PEX26Q7Z412 305 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 B4GALNT2Q8NHY0 566 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 ADAM22Q9P0K1 906 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 TMEM59LQ9UK28 342 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 DBR1Q9UK59 544 aaKnown RBP13.8□□□□□ -0.2
SMG8-202ENST00000543872 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 ATP6V0A2Q9Y487 856 aa13.8□□□□□ -0.2
SMG8-202ENST00000543872 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 NID2Q14112 1375 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 STXBP3O00186 592 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 TECP42680 631 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 MTA1Q13330 715 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 SLC18A3Q16572 532 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 GIGYF2Q6Y7W6 1299 aaKnown RBP13.79□□□□□ -0.2
SMG8-202ENST00000543872 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 ATXN2LQ8WWM7 1075 aaKnown RBP13.79□□□□□ -0.2
SMG8-202ENST00000543872 TLCD1Q96CP7 247 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 ORAI2Q96SN7 254 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 CHCHD3Q9NX63 227 aaKnown RBP13.79□□□□□ -0.2
SMG8-202ENST00000543872 LRRD1A4D1F6 860 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 SPDYE5A6NIY4 337 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 TRAF5O00463 557 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 HIP1RO75146 1068 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 DENND2CQ68D51 928 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 DZIP3Q86Y13 1208 aaKnown RBP13.79□□□□□ -0.2
SMG8-202ENST00000543872 GLIS3Q8NEA6 775 aa13.79□□□□□ -0.2
SMG8-202ENST00000543872 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMG8-202ENST00000543872 LGR5O75473 907 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 LUC7L3O95232 432 aaKnown RBP13.78□□□□□ -0.2
SMG8-202ENST00000543872 RCAN1P53805 252 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 COPS2P61201 443 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 IFI16Q16666 785 aaKnown RBP13.78□□□□□ -0.2
SMG8-202ENST00000543872 CNKSR1Q969H4 720 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 PBKQ96KB5 322 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 ZMYND12Q9H0C1 365 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 AFF2P51816 1311 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 GOLGA6L10A0A0M3HER8 536 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 TCP11X1B4DZS4 312 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 GNAT2P19087 354 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 USP11P51784 963 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
SMG8-202ENST00000543872 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 HHATQ5VTY9 493 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 ANKRD42Q8N9B4 389 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 TEKT4Q8WW24 435 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 NR2E1Q9Y466 385 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 H0Y3Z8 333 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 BCAMP50895 628 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 POLE2P56282 527 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 SLC29A2Q14542 456 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 ASIC2Q16515 512 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 NUGGCQ68CJ6 796 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 CENPPQ6IPU0 288 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 GLG1Q92896 1179 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 CENPTQ96BT3 561 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 ISCA1Q9BUE6 129 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 KCNMB3Q9NPA1 279 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 TBC1D7Q9P0N9 293 aa13.78□□□□□ -0.2
SMG8-202ENST00000543872 DISP2A7MBM2 1401 aa13.77□□□□□ -0.2
SMG8-202ENST00000543872 A6NHS1 94 aa13.77□□□□□ -0.2
SMG8-202ENST00000543872 SNX3O60493 162 aa13.77□□□□□ -0.2
SMG8-202ENST00000543872 PPFIA2O75334 1257 aa13.77□□□□□ -0.2
SMG8-202ENST00000543872 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.2
SMG8-202ENST00000543872 AMPD3Q01432 767 aa13.77□□□□□ -0.2
SMG8-202ENST00000543872 EVX2Q03828 476 aa13.77□□□□□ -0.2
SMG8-202ENST00000543872 UBAP2Q5T6F2 1119 aaKnown RBP13.77□□□□□ -0.2
SMG8-202ENST00000543872 ADAM7Q9H2U9 754 aa13.77□□□□□ -0.2
SMG8-202ENST00000543872 USP15Q9Y4E8 981 aaPredicted RBP13.77□□□□□ -0.2
SMG8-202ENST00000543872 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.2
SMG8-202ENST00000543872 MAP3K13O43283 966 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 AHCYL1O43865 530 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 FGGP02679 453 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 MYL1P05976 194 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 FESP07332 822 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 CALML3P27482 149 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 EPS15P42566 896 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 TUBP50607 506 aa13.77□□□□□ -0.21
SMG8-202ENST00000543872 EIF3BP55884 814 aaKnown RBP13.77□□□□□ -0.21
SMG8-202ENST00000543872 LONP2Q86WA8 852 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms