RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
SMCR5-201ENST00000543475 POTEMA6NI47 508 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 CCT8L1PA6NM43 557 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 F8W031 263 aaPredicted RBP13.7□□□□□ -0.22
SMCR5-201ENST00000543475 TTI1O43156 1089 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 PPP1R12BO60237 982 aaPredicted RBP13.7□□□□□ -0.22
SMCR5-201ENST00000543475 ATP6V1G2O95670 118 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 ITGA4P13612 1032 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 PTK2Q05397 1052 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 DYNLL2Q96FJ2 89 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 RAB34Q9BZG1 259 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 SLITRK6Q9H5Y7 841 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 NOD2Q9HC29 1040 aa13.7□□□□□ -0.22
SMCR5-201ENST00000543475 UTP11Q9Y3A2 253 aaKnown RBP13.7□□□□□ -0.22
SMCR5-201ENST00000543475 KIAA1551Q9HCM1 1747 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 BHMG1C9JSJ3 638 aaPredicted RBP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 PPIP5K2O43314 1243 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 NEBLO76041 1014 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 PAX7P23759 505 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 HOXA7P31268 230 aaPredicted RBP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 NAA25Q14CX7 972 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 ZCWPW2Q504Y3 356 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 PARP10Q53GL7 1025 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 ERMARDQ5T6L9 678 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 FOXR2Q6PJQ5 311 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 PEX26Q7Z412 305 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 LZTS2Q9BRK4 669 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 ATP8A1Q9Y2Q0 1164 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 GNA14O95837 355 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 COASYQ13057 564 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 TLDC1Q6P9B6 456 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 DNAAF5Q86Y56 855 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 TRIM59Q8IWR1 403 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 REXO1Q8N1G1 1221 aaKnown RBP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 LRRC57Q8N9N7 239 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 CUL5Q93034 780 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 CEP63Q96MT8 703 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 FAM114A2Q9NRY5 505 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 TBC1D7Q9P0N9 293 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 PNMA2Q9UL42 364 aa13.69□□□□□ -0.22
SMCR5-201ENST00000543475 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.69□□□□□ -0.22
SMCR5-201ENST00000543475 BUB1BO60566 1050 aaPredicted RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 PRDX5P30044 214 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 FXR2P51116 673 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 EIF3BP55884 814 aaKnown RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 FAM26FQ5R3K3 315 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 NELFCDQ8IXH7 590 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 MTMR9Q96QG7 549 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 SPAG5Q96R06 1193 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 TMEM47Q9BQJ4 181 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 TRIM31Q9BZY9 425 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 LRRC4CQ9HCJ2 640 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 SEC63Q9UGP8 760 aaKnown RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 SF3A3Q12874 501 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 ORC2Q13416 577 aaPredicted RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 ZNF571Q7Z3V5 609 aaPredicted RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 HOOK3Q86VS8 718 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 FMNL3Q8IVF7 1028 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 CENPTQ96BT3 561 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 NUDT12Q9BQG2 462 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 GANQ9H2C0 597 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 VAT1LQ9HCJ6 419 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 PANK4Q9NVE7 773 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 CCDC189A1A4V9 331 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 CAND2O75155 1236 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 NTSR2O95665 410 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 MMEP08473 750 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 CLTAP09496 248 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 PPP2R5AQ15172 486 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 C12orf60Q5U649 245 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 ALKBH5Q6P6C2 394 aaKnown RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 PNMA8AQ86V59 439 aaPredicted RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 KIRREL3Q8IZU9 778 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 TPCN2Q8NHX9 752 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 TLCD1Q96CP7 247 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 FMO2Q99518 471 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 SELENOSQ9BQE4 189 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 TRIM6Q9C030 488 aaPredicted RBP13.68□□□□□ -0.22
SMCR5-201ENST00000543475 TMEM260Q9NX78 707 aa13.68□□□□□ -0.22
SMCR5-201ENST00000543475 COL4A1P02462 1669 aa13.67□□□□□ -0.22
SMCR5-201ENST00000543475 TAF1P21675 1872 aa13.67□□□□□ -0.22
SMCR5-201ENST00000543475 CHN1P15882 459 aa13.67□□□□□ -0.22
SMCR5-201ENST00000543475 ACCSLQ4AC99 568 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms