RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 SAMD11Q96NU1 681 aa22.45■■□□□ 1.18
CACNA1C-230ENST00000543114 UBE2ZQ9H832 354 aaPredicted RBP22.45■■□□□ 1.18
CACNA1C-230ENST00000543114 SLC9A2Q9UBY0 812 aa22.45■■□□□ 1.18
CACNA1C-230ENST00000543114 TTC3P53804 2025 aa22.45■■□□□ 1.18
CACNA1C-230ENST00000543114 KLF18A0A0U1RQI7 1052 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 GOLGA8AA7E2F4 631 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 GOLGA8BA8MQT2 603 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 ARP10275 920 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 COL9A1P20849 921 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 ADCY7P51828 1080 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 TSGA10IPQ3SY00 556 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 FBXO47Q5MNV8 452 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 RSPH3Q86UC2 560 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 MRPL38Q96DV4 380 aaKnown RBP22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 FAM217BQ9NTX9 383 aaPredicted RBP22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 CDY2AQ9Y6F7 541 aa22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 V9GY48 417 aaPredicted RBP22.44■■□□□ 1.18
CACNA1C-230ENST00000543114 MYO7AQ13402 2215 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 NFASCO94856 1347 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 hCG_1984214I3L0E3 225 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 CDC45O75419 566 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 INSRRP14616 1297 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 CDC27P30260 824 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 ITGB3BPQ13352 177 aaPredicted RBP22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 ZNF713Q8N859 430 aaPredicted RBP22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 FAM49AQ9H0Q0 323 aaPredicted RBP22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 TMEM260Q9NX78 707 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 BARHL2Q9NY43 387 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 RAPGEFL1Q9UHV5 662 aa22.43■■□□□ 1.18
CACNA1C-230ENST00000543114 CLK2P49760 499 aaKnown RBP22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 ACTR2P61160 394 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 CEP55Q53EZ4 464 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 TEX2Q8IWB9 1127 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 TMEM192Q8IY95 271 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 TRAPPC12Q8WVT3 735 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 SDF4Q9BRK5 362 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 AZI2Q9H6S1 392 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 RC3H2Q9HBD1 1191 aaKnown RBP22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 AGO4Q9HCK5 861 aaKnown RBP22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 TRPC6Q9Y210 931 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 KIAA1671Q9BY89 1806 aa22.42■■□□□ 1.18
CACNA1C-230ENST00000543114 ADGRA3Q8IWK6 1321 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 SMCO2A6NFE2 343 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 H3BNC9 293 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 FOSP01100 380 aaPredicted RBP22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 LINC00271P0C7V0 271 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 CPA1P15085 419 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 SREBF1P36956 1147 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 MRPS6P82932 125 aaKnown RBP22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 GPM6BQ13491 265 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 KRT32Q14532 448 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 PLCB4Q15147 1175 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 TSHZ1Q6ZSZ6 1077 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 LINC01599Q8WXQ3 324 aa22.41■■□□□ 1.18
CACNA1C-230ENST00000543114 RRN3P2A6NIE6 340 aa22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 KCNA5P22460 613 aa22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 RCAN1P53805 252 aa22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 AP3B2Q13367 1082 aa22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 PTPROQ16827 1216 aa22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 TIGD5Q53EQ6 642 aa22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 IL17RAQ96F46 866 aa22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 AGO3Q9H9G7 860 aaKnown RBP22.4■■□□□ 1.18
CACNA1C-230ENST00000543114 MEIS1O00470 390 aa22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 CCNE2O96020 404 aa22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 CD52P31358 61 aa22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 CTNNB1P35222 781 aa22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 TMEM62Q0P6H9 643 aa22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 PLPPR4Q7Z2D5 763 aa22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 FIBCD1Q8N539 461 aa22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 NAP1L2Q9ULW6 460 aaPredicted RBP22.39■■□□□ 1.17
CACNA1C-230ENST00000543114 DDX39AO00148 427 aaKnown RBP22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 ENPP3O14638 875 aa22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 ADD1P35611 737 aaKnown RBP22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 STAT5BP51692 787 aa22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 LEXMQ3ZCV2 418 aa22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 BANK1Q8NDB2 785 aa22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 KHSRPQ92945 711 aaKnown RBP eCLIP22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 TRPV2Q9Y5S1 764 aa22.38■■□□□ 1.17
CACNA1C-230ENST00000543114 FAM86B1E9PN63 330 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 C5orf67F2Z3F1 127 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 ADAMTS3O15072 1205 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 ATG7O95352 703 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 RPLP2P05387 115 aaKnown RBP22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 HMGB1P09429 215 aaKnown RBP22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 FAM86B2P0C5J1 330 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 METAP2P50579 478 aaKnown RBP eCLIP22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 APOBRQ0VD83 1088 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 PFKFB3Q16875 520 aaPredicted RBP22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 TCEAL5Q5H9L2 206 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 JAKMIP3Q5VZ66 844 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 C1QTNF1Q9BXJ1 281 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 GLT8D2Q9H1C3 349 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 EPHX3Q9H6B9 360 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 CD320Q9NPF0 282 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 PCDHA2Q9Y5H9 948 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 NID2Q14112 1375 aa22.37■■□□□ 1.17
CACNA1C-230ENST00000543114 EVPLQ92817 2033 aa22.36■■□□□ 1.17
CACNA1C-230ENST00000543114 IGSF9BQ9UPX0 1349 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms