RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 MARCH8Q5T0T0 291 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 ZNF618Q5T7W0 954 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 OTOP2Q7RTS6 562 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 DEFB128Q7Z7B8 93 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 IL27Q8NEV9 243 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 SLC5A5Q92911 643 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 TNFRSF25Q93038 417 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 UIMC1Q96RL1 719 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 RIT2Q99578 217 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 WDR81Q562E7 1941 aa17.52■□□□□ 0.4
ECHDC2-223ENST00000542552 MBLAC1A4D2B0 266 aaPredicted RBP17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 NBNO60934 754 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 CAND2O75155 1236 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 TDP2O95551 362 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 KRT76Q01546 638 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 PPFIA1Q13136 1202 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 PLCB4Q15147 1175 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 GRIK4Q16099 956 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 INF2Q27J81 1249 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 RPAINQ86UA6 219 aa17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 SMAP1Q8IYB5 467 aaPredicted RBP17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 MTIF3Q9H2K0 278 aaKnown RBP17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 SH2B1Q9NRF2 756 aaPredicted RBP17.51■□□□□ 0.39
ECHDC2-223ENST00000542552 RRN3P2A6NIE6 340 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 INSRRP14616 1297 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 THPOP40225 353 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 EARS2Q5JPH6 523 aaKnown RBP17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 MIS18BP1Q6P0N0 1132 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 Q7L0L9 218 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 CCDC60Q8IWA6 550 aaPredicted RBP17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 DEFB123Q8N688 67 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 CHD7Q9P2D1 2997 aa17.5■□□□□ 0.39
ECHDC2-223ENST00000542552 MYH9P35579 1960 aaKnown RBP17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 CCDC194A0A1B0GVG4 234 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 PSMD10O75832 226 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 MMP1P03956 469 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 ATP4AP20648 1035 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 KRT2P35908 639 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 FAM26DQ5JW98 314 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 FAM160B1Q5W0V3 765 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 SWSAP1Q6NVH7 229 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 B3GNT9Q6UX72 402 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 RUFY4Q6ZNE9 571 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 ETNPPLQ8TBG4 499 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 MTMR10Q9NXD2 777 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 PCDHA10Q9Y5I2 948 aa17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 MAFBQ9Y5Q3 323 aaPredicted RBP17.49■□□□□ 0.39
ECHDC2-223ENST00000542552 POTEB3A0JP26 581 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 GRXCR1A8MXD5 290 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 BACH1O14867 736 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 ACTN1P12814 892 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 NR5A1Q13285 461 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 TCTN1Q2MV58 587 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 LRCH2Q5VUJ6 765 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 KRT40Q6A162 431 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 TAF2Q6P1X5 1199 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 POTEBQ6S5H4 581 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 PIK3AP1Q6ZUJ8 805 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 NEK8Q86SG6 692 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 ATP8B4Q8TF62 1192 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 FTOQ9C0B1 505 aaKnown RBP eCLIP17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 ZNF302Q9NR11 478 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 TUBE1Q9UJT0 475 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 SLC4A7Q9Y6M7 1214 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 GBF1Q92538 1859 aa17.48■□□□□ 0.39
ECHDC2-223ENST00000542552 FAM205CA6NFA0 338 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 WDR64B1ANS9 1081 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 SLC37A4O43826 429 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 GAS7O60861 476 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 BAIAP3O94812 1187 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 PSAPP07602 524 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 GCFC2P16383 781 aaKnown RBP17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 LETM2Q2VYF4 491 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 PDXDC2PQ6P474 469 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 CNKSR3Q6P9H4 555 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 GJA10Q969M2 543 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 TEKT3Q9BXF9 490 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 UNC45AQ9H3U1 944 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 KCNMB3Q9NPA1 279 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 DDX25Q9UHL0 483 aaKnown RBP17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 SIP14410 1827 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 IGSF9BQ9UPX0 1349 aa17.47■□□□□ 0.39
ECHDC2-223ENST00000542552 TRANK1O15050 2925 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 TMEM265A0A087WTH1 108 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 ZBTB42B2RXF5 422 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 BTBD18B2RXH4 712 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 ST18O60284 1047 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 HBP1O60381 514 aa17.46■□□□□ 0.39
ECHDC2-223ENST00000542552 DNAJB2P25686 324 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms