RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 HINFPQ9BQA5 517 aa8.79□□□□□ -1
PDLIM5-221ENST00000542407 HSD3B7Q9H2F3 369 aa8.79□□□□□ -1
PDLIM5-221ENST00000542407 KIF9Q9HAQ2 790 aa8.79□□□□□ -1
PDLIM5-221ENST00000542407 EDIL3O43854 480 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 STX10O60499 249 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 EEF2P13639 858 aaKnown RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 RANBP1P43487 201 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 NAPAP54920 295 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 MPP3Q13368 585 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 ARL6IP4Q66PJ3 421 aaKnown RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 TTBK2Q6IQ55 1244 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 ADGRF4Q8IZF3 695 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 NOA1Q8NC60 698 aaKnown RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 MSANTD4Q8NCY6 345 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 ZBTB10Q96DT7 871 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 MMADHCQ9H3L0 296 aaPredicted RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 JADE2Q9NQC1 790 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 PCDHA5Q9Y5H7 936 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 CTAGE9A4FU28 777 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 SMCO2A6NFE2 343 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 BOLA2-SMG1P6H3BVE0 249 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 SYF2O95926 243 aaKnown RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 CDR1P51861 262 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 SEPT2Q15019 361 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 POSTNQ15063 836 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 SKIV2LQ15477 1246 aaKnown RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 SPDYE2Q495Y8 402 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 GRAMD1CQ8IYS0 662 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 FAM76AQ8TAV0 307 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 CABS1Q96KC9 395 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 MTFR1LQ9H019 292 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 TMEM60Q9H2L4 133 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 GPCPD1Q9NPB8 672 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 TRPV5Q9NQA5 729 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 PIM2Q9P1W9 311 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 ZNF70Q9UC06 446 aaPredicted RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 SEC63Q9UGP8 760 aaKnown RBP8.78□□□□□ -1
PDLIM5-221ENST00000542407 PGAP2Q9UHJ9 254 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 ZNRF3Q9ULT6 936 aa8.78□□□□□ -1
PDLIM5-221ENST00000542407 LRRC10BA6NIK2 292 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 KIAA0754O94854 1291 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 GGCXP38435 758 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 GPATCH4Q5T3I0 446 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 TMEM179Q6ZVK1 233 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 POTEDQ86YR6 584 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 AGBL3Q8NEM8 1001 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 KANSL2Q9H9L4 492 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 VAT1LQ9HCJ6 419 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 MCM8Q9UJA3 840 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 MAN1B1Q9UKM7 699 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 PNMA6FA0A0J9YX94 578 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 CCDC194A0A1B0GVG4 234 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 NFKBIEO00221 500 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 IKBKBO14920 756 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 E2F6O75461 281 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 RTN3O95197 1032 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 IRAK1P51617 712 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 NCAPH2Q6IBW4 605 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 KCTD1Q719H9 257 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 CCDC80Q76M96 950 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 OTUD6AQ7L8S5 288 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 CEP57Q86XR8 500 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 GSPT2Q8IYD1 628 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 SLC35F6Q8N357 371 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 TC2NQ8N9U0 490 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 GMCL1P1Q8NEA9 526 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 ENOX1Q8TC92 643 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 SCLT1Q96NL6 688 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 CENPOQ9BU64 300 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 TSGA10Q9BZW7 698 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 UBAP1Q9NZ09 502 aa8.77□□□□□ -1.01
PDLIM5-221ENST00000542407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 GDF11O95390 407 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 GNGT1P63211 74 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 CXCL9Q07325 125 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 TMED1Q13445 227 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 STIM1Q13586 685 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 LAMB3Q13751 1172 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 MORC3Q14149 939 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 GJC2Q5T442 439 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 PPP1R18Q6NYC8 613 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 PDXDC2PQ6P474 469 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 KRT25Q7Z3Z0 450 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 ZSCAN29Q8IWY8 852 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 VPS37AQ8NEZ2 397 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 DCAF4Q8WV16 495 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 COA7Q96BR5 231 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 CSRNP1Q96S65 589 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 C6orf50Q9HD87 102 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 INTS13Q9NVM9 706 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 BARX2Q9UMQ3 279 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 CLRN2A0PK11 232 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 TRIM64CA6NLI5 447 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 TCP10L2B9ZVM9 353 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 USP17L10C9JJH3 530 aa8.76□□□□□ -1.01
PDLIM5-221ENST00000542407 EIF4BP23588 611 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms