RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 PTPRFP10586 1907 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 P4HBP07237 508 aaKnown RBP12.25□□□□□ -0.45
SCG3-202ENST00000542355 MUTP22033 750 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 GIT2Q14161 759 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 STXBP2Q15833 593 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 HERC4Q5GLZ8 1057 aaPredicted RBP12.25□□□□□ -0.45
SCG3-202ENST00000542355 BRI3BPQ8WY22 251 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 NACC1Q96RE7 527 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 TBC1D7Q9P0N9 293 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 SOWAHBA6NEL2 793 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 ESPNB1AK53 854 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 CBFA2T2O43439 604 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
SCG3-202ENST00000542355 STAM2O75886 525 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 CCNE2O96020 404 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 PGK2P07205 417 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 PTGS1P23219 599 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 PPP1R2P41236 205 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
SCG3-202ENST00000542355 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 ERVK-24P63145 666 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 LRRC41Q15345 812 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 GNPTABQ3T906 1256 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 CDKAL1Q5VV42 579 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 SPRYD7Q5W111 196 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 GLIS3Q8NEA6 775 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 NEK9Q8TD19 979 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 P2RX5Q93086 422 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 RUSC1Q9BVN2 902 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 BCAS3Q9H6U6 928 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 TCEAL9Q9UHQ7 104 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 LOC285556D6RIA3 1793 aa12.25□□□□□ -0.45
SCG3-202ENST00000542355 SPATA31C2B4DYI2 1134 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 KCNA2P16389 499 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 CCNE1P24864 410 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 MLLT3P42568 568 aaPredicted RBP12.24□□□□□ -0.45
SCG3-202ENST00000542355 HUNKP57058 714 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 KRT76Q01546 638 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 COBLL1Q53SF7 1204 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 ANKRD40Q6AI12 368 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 RINT1Q6NUQ1 792 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 TRMT1LQ7Z2T5 733 aaKnown RBP12.24□□□□□ -0.45
SCG3-202ENST00000542355 ZSCAN30Q86W11 494 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 ANKRD13CQ8N6S4 541 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 FAM133AQ8N9E0 248 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 EEF2KMTQ96G04 330 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 CDHR1Q96JP9 859 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 TRIM47Q96LD4 638 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 REEP2Q9BRK0 252 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 SRRTQ9BXP5 876 aaKnown RBP12.24□□□□□ -0.45
SCG3-202ENST00000542355 ZSWIM4Q9H7M6 989 aa12.24□□□□□ -0.45
SCG3-202ENST00000542355 ADD3Q9UEY8 706 aaKnown RBP12.24□□□□□ -0.45
SCG3-202ENST00000542355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
SCG3-202ENST00000542355 WDR64B1ANS9 1081 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 SORBS3O60504 671 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 COPB2P35606 906 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 QARSP47897 775 aaKnown RBP12.23□□□□□ -0.45
SCG3-202ENST00000542355 KCTD2Q14681 263 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 PTPN21Q16825 1174 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 FAM26FQ5R3K3 315 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 SEPT14Q6ZU15 432 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 GPRC5AQ8NFJ5 357 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 MMP19Q99542 508 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 SEMA6BQ9H3T3 888 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 MROH8Q9H579 483 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.23□□□□□ -0.45
SCG3-202ENST00000542355 BICDL2A1A5D9 508 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 FRMD3A2A2Y4 597 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 RSPH10B2B2RC85 870 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 TPM3P06753 285 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 RSPH10BP0C881 870 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 ZBTB48P10074 688 aaPredicted RBP12.23□□□□□ -0.45
SCG3-202ENST00000542355 SFNP31947 248 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 JAK3P52333 1124 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 SP4Q02446 784 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 CENPPQ6IPU0 288 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 C1orf186Q6ZWK4 172 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 TMC6Q7Z403 805 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 ANKRD23Q86SG2 305 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 GUF1Q8N442 669 aaKnown RBP12.23□□□□□ -0.45
SCG3-202ENST00000542355 PTPN18Q99952 460 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 FGFBP2Q9BYJ0 223 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 PORCNQ9H237 461 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 INTS13Q9NVM9 706 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 PCDHA2Q9Y5H9 948 aa12.23□□□□□ -0.45
SCG3-202ENST00000542355 SFI1A8K8P3 1242 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 MSNP26038 577 aaKnown RBP12.22□□□□□ -0.45
SCG3-202ENST00000542355 SP2Q02086 613 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 ZNF746Q6NUN9 644 aaPredicted RBP12.22□□□□□ -0.45
SCG3-202ENST00000542355 EEPD1Q7L9B9 569 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 APTXQ7Z2E3 356 aaKnown RBP12.22□□□□□ -0.45
SCG3-202ENST00000542355 MYOCDQ8IZQ8 938 aa12.22□□□□□ -0.45
SCG3-202ENST00000542355 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms