RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 KIF5BP33176 963 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 SMAD2Q15796 467 aaKnown RBP13.97□□□□□ -0.17
COPS7A-213ENST00000542150 TSHZ1Q6ZSZ6 1077 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 CTCFLQ8NI51 663 aaPredicted RBP13.97□□□□□ -0.17
COPS7A-213ENST00000542150 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 CLDND1Q9NY35 253 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 TUBE1Q9UJT0 475 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 CDY2AQ9Y6F7 541 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 SQORQ9Y6N5 450 aa13.97□□□□□ -0.17
COPS7A-213ENST00000542150 SH2B2O14492 632 aaPredicted RBP13.96□□□□□ -0.17
COPS7A-213ENST00000542150 MAFGO15525 162 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 MBTPS2O43462 519 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 DNAJB1P25685 340 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 MARK3P27448 753 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
COPS7A-213ENST00000542150 IRS1P35568 1242 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 GNAQP50148 359 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 MRPS6P82932 125 aaKnown RBP13.96□□□□□ -0.17
COPS7A-213ENST00000542150 RSPH3Q86UC2 560 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 CMTR1Q8N1G2 835 aaKnown RBP13.96□□□□□ -0.17
COPS7A-213ENST00000542150 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 ZBTB10Q96DT7 871 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 PLVAPQ9BX97 442 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 PLAGL2Q9UPG8 496 aa13.96□□□□□ -0.17
COPS7A-213ENST00000542150 RBM8AQ9Y5S9 174 aaKnown RBP13.96□□□□□ -0.17
COPS7A-213ENST00000542150 RRN3P2A6NIE6 340 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 LINC01565O15544 149 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 PRC1O43663 620 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 TBX10O75333 385 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 INSRRP14616 1297 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 CD52P31358 61 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 LIFRP42702 1097 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 ADAM15Q13444 863 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 MTMR1Q13613 665 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 BTG3Q14201 252 aaPredicted RBP13.95□□□□□ -0.18
COPS7A-213ENST00000542150 UBE2SQ16763 222 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 P2RX5Q93086 422 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 TMEM87BQ96K49 555 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 MSLNLQ96KJ4 702 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
COPS7A-213ENST00000542150 PCDHA6Q9UN73 950 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 PCDHA8Q9Y5H6 950 aa13.95□□□□□ -0.18
COPS7A-213ENST00000542150 MRPL42Q9Y6G3 142 aaKnown RBP13.95□□□□□ -0.18
COPS7A-213ENST00000542150 EYA4O95677 639 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 RPLP2P05387 115 aaKnown RBP13.94□□□□□ -0.18
COPS7A-213ENST00000542150 RXRAP19793 462 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 NAALADL2Q58DX5 795 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 CMTR2Q8IYT2 770 aaKnown RBP13.94□□□□□ -0.18
COPS7A-213ENST00000542150 CYP2W1Q8TAV3 490 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 SPPL3Q8TCT6 385 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 GLG1Q92896 1179 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 LSG1Q9H089 658 aaKnown RBP13.94□□□□□ -0.18
COPS7A-213ENST00000542150 KCNH6Q9H252 994 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 ALG13Q9NP73 1137 aaKnown RBP13.94□□□□□ -0.18
COPS7A-213ENST00000542150 KCNH7Q9NS40 1196 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 PCDHA2Q9Y5H9 948 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 C5orf42Q9H799 3197 aa13.94□□□□□ -0.18
COPS7A-213ENST00000542150 TTC3P53804 2025 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 KDM3AQ9Y4C1 1321 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 ATG7O95352 703 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 ITGB1P05556 798 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 MCM5P33992 734 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 SMAD4Q13485 552 aaKnown RBP13.93□□□□□ -0.18
COPS7A-213ENST00000542150 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 HERC4Q5GLZ8 1057 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-213ENST00000542150 IER5Q5VY09 327 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 TMTC3Q6ZXV5 915 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 ALYREFQ86V81 257 aaKnown RBP13.93□□□□□ -0.18
COPS7A-213ENST00000542150 NPAS4Q8IUM7 802 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 MXRA8Q9BRK3 442 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 FTHL17Q9BXU8 183 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
COPS7A-213ENST00000542150 TMX1Q9H3N1 280 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
COPS7A-213ENST00000542150 PKD2L1Q9P0L9 805 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 CLEC1BQ9P126 229 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 PADI3Q9ULW8 664 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 WDFY4Q6ZS81 3184 aa13.93□□□□□ -0.18
COPS7A-213ENST00000542150 NFASCO94856 1347 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 IGSF9BQ9UPX0 1349 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 IGKV6D-21A0A0A0MT36 114 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 SMIM35A0A1B0GVV1 85 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 SPDYE3A6NKU9 549 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 SLC27A2O14975 620 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 CALM1P0DP23 149 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 CALM2P0DP24 149 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 CALM3P0DP25 149 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 IGBP1P78318 339 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 NHLH1Q02575 133 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 FUT2Q10981 343 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 ITGB3BPQ13352 177 aaPredicted RBP13.92□□□□□ -0.18
COPS7A-213ENST00000542150 NECTIN1Q15223 517 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 CLUL1Q15846 466 aa13.92□□□□□ -0.18
COPS7A-213ENST00000542150 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms