RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 ARP10275 920 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 KCNMA1Q12791 1236 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 EPHA7Q15375 998 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 BMT2Q1RMZ1 405 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 RSRC2Q7L4I2 434 aaKnown RBP11.94□□□□□ -0.5
NECAP1-206ENST00000542095 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 PIGOQ8TEQ8 1089 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 NUCKS1Q9H1E3 243 aaKnown RBP11.94□□□□□ -0.5
NECAP1-206ENST00000542095 OLFML3Q9NRN5 406 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 RPTORQ8N122 1335 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 LTBP3Q9NS15 1303 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 RSPH10B2B2RC85 870 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 IPO5O00410 1097 aaKnown RBP11.94□□□□□ -0.5
NECAP1-206ENST00000542095 RSPH10BP0C881 870 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 MYBP10242 640 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 BCRP11274 1271 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 EPS15P42566 896 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 GMPSP49915 693 aaPredicted RBP11.94□□□□□ -0.5
NECAP1-206ENST00000542095 GHRHRQ02643 423 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 PDXDC1Q6P996 788 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 SRGAP1Q7Z6B7 1085 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 SAMD3Q8N6K7 520 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 SMCR8Q8TEV9 937 aaPredicted RBP11.94□□□□□ -0.5
NECAP1-206ENST00000542095 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 RIT2Q99578 217 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 TSGA10Q9BZW7 698 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 UNC45AQ9H3U1 944 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
NECAP1-206ENST00000542095 MAP3K20Q9NYL2 800 aaKnown RBP11.94□□□□□ -0.5
NECAP1-206ENST00000542095 CEP72Q9P209 647 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 TRIM10Q9UDY6 481 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 PNMA2Q9UL42 364 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 BCS1LQ9Y276 419 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 LRRC53A6NM62 1247 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 PRPF6O94906 941 aaKnown RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 GCNT3O95395 438 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 RPL13P26373 211 aaKnown RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 VAV2P52735 878 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 USP14P54578 494 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 TEX35Q5T0J7 233 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 DCAF15Q66K64 600 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 SLC30A10Q6XR72 485 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 C1orf186Q6ZWK4 172 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 NIPA1Q7RTP0 329 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 SAMD7Q7Z3H4 446 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 FRMD5Q7Z6J6 570 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 CCDC155Q8N6L0 562 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 NEK9Q8TD19 979 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 BAP1Q92560 729 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 DEF6Q9H4E7 631 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 SLC38A10Q9HBR0 1119 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 KCND2Q9NZV8 630 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 CNOT7Q9UIV1 285 aaKnown RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 NFIBO00712 420 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 FLOT1O75955 427 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 ALAS1P13196 640 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 TUBB4BP68371 445 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 WHAMMP3Q1A5X7 153 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 GLIPR1L2Q4G1C9 344 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 TBC1D10BQ4KMP7 808 aaPredicted RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 B3GNT9Q6UX72 402 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 CPXCR1Q8N123 301 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 LSM14BQ9BX40 385 aaKnown RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 ARHGAP20Q9P2F6 1191 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 GJA3Q9Y6H8 435 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 FRMPD4Q14CM0 1322 aa11.93□□□□□ -0.5
NECAP1-206ENST00000542095 COL11A1P12107 1806 aaPredicted RBP11.93□□□□□ -0.5
NECAP1-206ENST00000542095 USO1O60763 962 aaKnown RBP11.92□□□□□ -0.5
NECAP1-206ENST00000542095 PLEKP08567 350 aaPredicted RBP11.92□□□□□ -0.5
NECAP1-206ENST00000542095 HOXD13P35453 343 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 KIF11P52732 1056 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 KIF5AQ12840 1032 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 MTMR2Q13614 643 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 MYCT1Q8N699 235 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 SYN2Q92777 582 aaPredicted RBP11.92□□□□□ -0.5
NECAP1-206ENST00000542095 PARVGQ9HBI0 331 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 RAVER2Q9HCJ3 691 aaKnown RBP11.92□□□□□ -0.5
NECAP1-206ENST00000542095 OGFRQ9NZT2 677 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 COL20A1Q9P218 1284 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 SEL1LQ9UBV2 794 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 ARMCX3Q9UH62 379 aaPredicted RBP11.92□□□□□ -0.5
NECAP1-206ENST00000542095 DDX41Q9UJV9 622 aaKnown RBP11.92□□□□□ -0.5
NECAP1-206ENST00000542095 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 FZD9O00144 591 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 SLC16A3O15427 465 aaKnown RBP11.92□□□□□ -0.5
NECAP1-206ENST00000542095 AKR1B10O60218 316 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 ZBED4O75132 1171 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 LCA5LO95447 670 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 FDX1P10109 184 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 ITGB5P18084 799 aa11.92□□□□□ -0.5
NECAP1-206ENST00000542095 VCAM1P19320 739 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms