RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 L2HGDHQ9H9P8 463 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 RBPJLQ9UBG7 517 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 PCDHA9Q9Y5H5 950 aa5.71□□□□□ -1.5
SNHG1-217ENST00000541578 CCDC163A0A0D9SF12 145 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 ARVCFO00192 962 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 GSTA4O15217 222 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 PRICKLE3O43900 615 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-217ENST00000541578 CRTAMO95727 393 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 SRGAP2CP0DJJ0 459 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 ST5P78524 1137 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 GPR19Q15760 415 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 TKFCQ3LXA3 575 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 CCDC181Q5TID7 509 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 VASNQ6EMK4 673 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 EP400NLQ6ZTU2 488 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 C16orf59Q7L2K0 433 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 FERMT3Q86UX7 667 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 NLGN4XQ8N0W4 816 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 JMYQ8N9B5 988 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 WASF3Q9UPY6 502 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 TELO2Q9Y4R8 837 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 CD2APQ9Y5K6 639 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 NCANO14594 1321 aa5.7□□□□□ -1.5
SNHG1-217ENST00000541578 TCRBV5S4A2TA0A5A2 114 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 MROH6A6NGR9 719 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 EFCAB14O75071 495 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 CYP1A1P04798 512 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-217ENST00000541578 CKMP06732 381 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 CELA3BP08861 270 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 ENO2P09104 434 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-217ENST00000541578 PDE6AP16499 860 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 ZNF28P17035 718 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 CNR2P34972 360 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 SOX5P35711 763 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 MLLT6P55198 1093 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-217ENST00000541578 RTP5Q14D33 572 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 BORAQ6PGQ7 559 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 OSTM1Q86WC4 334 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 PROSER1Q86XN7 944 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 ZC3H7AQ8IWR0 971 aaKnown RBP5.69□□□□□ -1.5
SNHG1-217ENST00000541578 DTX3Q8N9I9 347 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 SH3RF2Q8TEC5 729 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 CHAC2Q8WUX2 184 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 LCORQ96JN0 433 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-217ENST00000541578 MAGEB10Q96LZ2 347 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-217ENST00000541578 CHMP4AQ9BY43 222 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 CD244Q9BZW8 370 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
SNHG1-217ENST00000541578 NDOR1Q9UHB4 597 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 DUSP10Q9Y6W6 482 aa5.69□□□□□ -1.5
SNHG1-217ENST00000541578 C9orf118A6NHY6 69 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 PYGMP11217 842 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 MYCLP1P12525 358 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-217ENST00000541578 PLP2Q04941 152 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 CRY1Q16526 586 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 FAM47CQ5HY64 1035 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 BTBD8Q5XKL5 378 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 NIM1KQ8IY84 436 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 LGI4Q8N135 537 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 TMEM168Q9H0V1 697 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 DLL4Q9NR61 685 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 HOMER2Q9NSB8 354 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 SRPK3Q9UPE1 567 aa5.68□□□□□ -1.5
SNHG1-217ENST00000541578 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 CCDC66A2RUB6 948 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 ACOT7O00154 380 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 FBXO21O94952 628 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 KRT15P19012 456 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 DNM2P50570 870 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 AMPD3Q01432 767 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 PFKPQ01813 784 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 PLEKHG6Q3KR16 790 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 DALRD3Q5D0E6 543 aaKnown RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 CD276Q5ZPR3 534 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 TRMT10BQ6PF06 316 aaKnown RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 PTRH1Q86Y79 214 aaKnown RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 DHX37Q8IY37 1157 aaKnown RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 GSTCDQ8NEC7 633 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 SLC7A14Q8TBB6 771 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 NINJ1Q92982 152 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 YTHDC1Q96MU7 727 aaKnown RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 BDH2Q9BUT1 245 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 SLC52A2Q9HAB3 445 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 TYW1Q9NV66 732 aaKnown RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 FTSJ1Q9UET6 329 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 MCM8Q9UJA3 840 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 CBLCQ9ULV8 474 aa5.67□□□□□ -1.5
SNHG1-217ENST00000541578 G3BP2Q9UN86 482 aaKnown RBP5.67□□□□□ -1.5
SNHG1-217ENST00000541578 MAN2B1O00754 1011 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 AMY2AP04746 511 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 CHGBP05060 677 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 CPEP16870 476 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 AMY2BP19961 511 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 BUD31P41223 144 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-217ENST00000541578 GLRBP48167 497 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 JAM2P57087 298 aa5.66□□□□□ -1.5
SNHG1-217ENST00000541578 SKIDA1Q1XH10 827 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms