RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 SPZ1Q9BXG8 430 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 OSBPL7Q9BZF2 842 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 RC3H2Q9HBD1 1191 aaKnown RBP14.09□□□□□ -0.15
SNHG1-216ENST00000541416 DOCK5Q9H7D0 1870 aa14.09□□□□□ -0.15
SNHG1-216ENST00000541416 MAFGO15525 162 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 DGKIO75912 1065 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 MARK3P27448 753 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 SMARCA1P28370 1054 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 MRPS6P82932 125 aaKnown RBP14.08□□□□□ -0.16
SNHG1-216ENST00000541416 MGAT3Q09327 533 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 ADAM15Q13444 863 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 MTMR1Q13613 665 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 USP17L6PQ6QN14 398 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 RUFY4Q6ZNE9 571 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 NPAS4Q8IUM7 802 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 DNAJB3Q8WWF6 145 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 EDAQ92838 391 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 AZI2Q9H6S1 392 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 ALG13Q9NP73 1137 aaKnown RBP14.08□□□□□ -0.16
SNHG1-216ENST00000541416 MUTYHQ9UIF7 546 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 PLAGL2Q9UPG8 496 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 CDY2AQ9Y6F7 541 aa14.08□□□□□ -0.16
SNHG1-216ENST00000541416 TTC3P53804 2025 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 MBLAC1A4D2B0 266 aaPredicted RBP14.07□□□□□ -0.16
SNHG1-216ENST00000541416 SPDYE3A6NKU9 549 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 TBX10O75333 385 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 DDAH1O94760 285 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 CSPG5O95196 566 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 CYP21A2P08686 494 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 LINC00271P0C7V0 271 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 DLX2Q07687 328 aaPredicted RBP14.07□□□□□ -0.16
SNHG1-216ENST00000541416 SLC35G1Q2M3R5 365 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 BMP8AQ7Z5Y6 402 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 SUGP1Q8IWZ8 645 aaKnown RBP14.07□□□□□ -0.16
SNHG1-216ENST00000541416 PSTPIP2Q9H939 334 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 LRFN2Q9ULH4 789 aa14.07□□□□□ -0.16
SNHG1-216ENST00000541416 MYO7AQ13402 2215 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 E7EWF7 191 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 MEIS2O14770 477 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 EYA4O95677 639 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 KCNA2P16389 499 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 PTPN5P54829 565 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 IGBP1P78318 339 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 PAK2Q13177 524 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 CASC1Q6TDU7 716 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 TMTC2Q8N394 836 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 FAM49AQ9H0Q0 323 aaPredicted RBP14.06□□□□□ -0.16
SNHG1-216ENST00000541416 AAASQ9NRG9 546 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 SUPT16HQ9Y5B9 1047 aaKnown RBP14.06□□□□□ -0.16
SNHG1-216ENST00000541416 TRPV2Q9Y5S1 764 aa14.06□□□□□ -0.16
SNHG1-216ENST00000541416 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 SRGAP2BP0DMP2 458 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 CALM1P0DP23 149 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 CALM2P0DP24 149 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 CALM3P0DP25 149 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 SCG2P13521 617 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 CD52P31358 61 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 NFXL1Q6ZNB6 911 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 ZNF654Q8IZM8 581 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 NME8Q8N427 588 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 PBXIP1Q96AQ6 731 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 MSLNLQ96KJ4 702 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
SNHG1-216ENST00000541416 TRPC6Q9Y210 931 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 PCDHB12Q9Y5F1 795 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 MRPL42Q9Y6G3 142 aaKnown RBP14.05□□□□□ -0.16
SNHG1-216ENST00000541416 ATG2AQ2TAZ0 1938 aa14.05□□□□□ -0.16
SNHG1-216ENST00000541416 TMEM221A6NGB7 291 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 CCDC69A6NI79 296 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 M0R296 226 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 LINC01565O15544 149 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 ATP9AO75110 1047 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 IGHDP01880 384 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 ITGB1P05556 798 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 INSRRP14616 1297 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 GTF2F1P35269 517 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNHG1-216ENST00000541416 NRIP1P48552 1158 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 UBE3AQ05086 875 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 COASYQ13057 564 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 PAN2Q504Q3 1202 aaKnown RBP14.04□□□□□ -0.16
SNHG1-216ENST00000541416 SPOUT1Q5T280 376 aaKnown RBP14.04□□□□□ -0.16
SNHG1-216ENST00000541416 TRIM67Q6ZTA4 783 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 KLHL23Q8NBE8 558 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 SMRP1Q8NCR6 262 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 SPPL3Q8TCT6 385 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 IGDCC4Q8TDY8 1250 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 MICAL1Q8TDZ2 1067 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 POF1BQ8WVV4 589 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 SDF4Q9BRK5 362 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 IRF2BPLQ9H1B7 796 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 TLE6Q9H808 572 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 SENP2Q9HC62 589 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 JADE2Q9NQC1 790 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 PADI3Q9ULW8 664 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 PCDHA2Q9Y5H9 948 aa14.04□□□□□ -0.16
SNHG1-216ENST00000541416 RBAK-RBAKDNI3L0D1 243 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms