RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 PTK7Q13308 1070 aa22.68■■□□□ 1.22
RAP1B-223ENST00000541167 GNL2Q13823 731 aaKnown RBP22.68■■□□□ 1.22
RAP1B-223ENST00000541167 RETREG2Q8NC44 543 aa22.68■■□□□ 1.22
RAP1B-223ENST00000541167 ETNPPLQ8TBG4 499 aa22.68■■□□□ 1.22
RAP1B-223ENST00000541167 CAGE1Q8TC20 777 aa22.68■■□□□ 1.22
RAP1B-223ENST00000541167 DHX38Q92620 1227 aaKnown RBP22.68■■□□□ 1.22
RAP1B-223ENST00000541167 ZNF302Q9NR11 478 aa22.68■■□□□ 1.22
RAP1B-223ENST00000541167 SMC3Q9UQE7 1217 aa22.68■■□□□ 1.22
RAP1B-223ENST00000541167 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.68■■□□□ 1.22
RAP1B-223ENST00000541167 NRCAMQ92823 1304 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 IGKV6D-21A0A0A0MT36 114 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 WDR64B1ANS9 1081 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 PITPNM1O00562 1244 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 PSAPP07602 524 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 HOXC8P31273 242 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 EPHB4P54760 987 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 PLPPR4Q7Z2D5 763 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 CCDC60Q8IWA6 550 aaPredicted RBP22.67■■□□□ 1.22
RAP1B-223ENST00000541167 LMBR1Q8WVP7 490 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 SCLYQ96I15 445 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 FOXP1Q9H334 677 aaPredicted RBP22.67■■□□□ 1.22
RAP1B-223ENST00000541167 UNC45AQ9H3U1 944 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 TRPC6Q9Y210 931 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 PCDHA10Q9Y5I2 948 aa22.67■■□□□ 1.22
RAP1B-223ENST00000541167 TREHO43280 583 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 MARCH6O60337 910 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 PSMD10O75832 226 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 PLCB4Q15147 1175 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 GRIK4Q16099 956 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 SWSAP1Q6NVH7 229 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 PDXDC2PQ6P474 469 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 SERINC5Q86VE9 423 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 POTEDQ86YR6 584 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 AFAP1L1Q8TED9 768 aa22.66■■□□□ 1.22
RAP1B-223ENST00000541167 SFNP31947 248 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 SLC26A2P50443 739 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 JAK3P52333 1124 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 SHHQ15465 462 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 C9orf50Q5SZB4 431 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 TNPO1Q92973 898 aaKnown RBP22.65■■□□□ 1.22
RAP1B-223ENST00000541167 WNT8BQ93098 351 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 FAM20AQ96MK3 541 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 KCNMB3Q9NPA1 279 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 IL23AQ9NPF7 189 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 DISC1Q9NRI5 854 aa22.65■■□□□ 1.22
RAP1B-223ENST00000541167 ACRP10323 421 aa22.64■■□□□ 1.21
RAP1B-223ENST00000541167 ATP2B1P20020 1258 aa22.64■■□□□ 1.21
RAP1B-223ENST00000541167 IGBP1P78318 339 aa22.64■■□□□ 1.21
RAP1B-223ENST00000541167 MIER3Q7Z3K6 550 aa22.64■■□□□ 1.21
RAP1B-223ENST00000541167 GABBR1Q9UBS5 961 aa22.64■■□□□ 1.21
RAP1B-223ENST00000541167 POTEB3A0JP26 581 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 KIF28PB7ZC32 967 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 TBX3O15119 743 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 IQCF3P0C7M6 154 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 CKBP12277 381 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 INSRRP14616 1297 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 SELPP16109 830 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 RBL2Q08999 1139 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 CUL4AQ13619 759 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 TRIM71Q2Q1W2 868 aaKnown RBP22.63■■□□□ 1.21
RAP1B-223ENST00000541167 POTEBQ6S5H4 581 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 LRRC8DQ7L1W4 858 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 CKAP2LQ8IYA6 745 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 TUBE1Q9UJT0 475 aa22.63■■□□□ 1.21
RAP1B-223ENST00000541167 IGSF9BQ9UPX0 1349 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 RRN3P2A6NIE6 340 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 H3BQV1 296 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 WNT7AO00755 349 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 BAG4O95429 457 aaKnown RBP22.62■■□□□ 1.21
RAP1B-223ENST00000541167 THPOP40225 353 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 ADAM17P78536 824 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 PSRC1Q6PGN9 363 aaPredicted RBP22.62■■□□□ 1.21
RAP1B-223ENST00000541167 NOSTRINQ8IVI9 506 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 RPUSD2Q8IZ73 545 aaKnown RBP22.62■■□□□ 1.21
RAP1B-223ENST00000541167 RDM1Q8NG50 284 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 ATP8B4Q8TF62 1192 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 HAS1Q92839 578 aa22.62■■□□□ 1.21
RAP1B-223ENST00000541167 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.62■■□□□ 1.21
RAP1B-223ENST00000541167 MAFBQ9Y5Q3 323 aaPredicted RBP22.62■■□□□ 1.21
RAP1B-223ENST00000541167 K7ELQ4 463 aaPredicted RBP22.61■■□□□ 1.21
RAP1B-223ENST00000541167 HBP1O60381 514 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 NEMFO60524 1076 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 RFC2P35250 354 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 CALCRLQ16602 461 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 B3GNT9Q6UX72 402 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 C16orf59Q7L2K0 433 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 DEFB128Q7Z7B8 93 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 SLFN12Q8IYM2 578 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 RNPC3Q96LT9 517 aaKnown RBP22.61■■□□□ 1.21
RAP1B-223ENST00000541167 VAV3Q9UKW4 847 aa22.61■■□□□ 1.21
RAP1B-223ENST00000541167 NOL7Q9UMY1 257 aaKnown RBP22.61■■□□□ 1.21
RAP1B-223ENST00000541167 PFKMP08237 780 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 ATP4AP20648 1035 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 MCM7P33993 719 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 PPP2R5CQ13362 524 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 TMEM240Q5SV17 173 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 ZNF618Q5T7W0 954 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 MCTP1Q6DN14 999 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 ZNF365Q70YC5 407 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 TRMT1LQ7Z2T5 733 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms