RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 BRMS1Q9HCU9 246 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 GTF3C3Q9Y5Q9 886 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 SZT2Q5T011 3432 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 ARID2Q68CP9 1835 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 MBLAC1A4D2B0 266 aaPredicted RBP14.85□□□□□ -0.03
LTBR-208ENST00000541005 SLC34A2O95436 690 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 TDP2O95551 362 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 CKBP12277 381 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 GCFC2P16383 781 aaKnown RBP14.85□□□□□ -0.03
LTBR-208ENST00000541005 HMGN5P82970 282 aaKnown RBP14.85□□□□□ -0.03
LTBR-208ENST00000541005 INF2Q27J81 1249 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 PPP4R3AQ6IN85 833 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 TRAF7Q6Q0C0 670 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 ZNF365Q70YC5 407 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 LRRC8DQ7L1W4 858 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 NEK8Q86SG6 692 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 ETNPPLQ8TBG4 499 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 ATP6V0A1Q93050 837 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 LRCH3Q96II8 777 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 SETD4Q9NVD3 440 aa14.85□□□□□ -0.03
LTBR-208ENST00000541005 DDX39AO00148 427 aaKnown RBP14.84□□□□□ -0.03
LTBR-208ENST00000541005 TREHO43280 583 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 ACRP10323 421 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 MCM2P49736 904 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 STAT5BP51692 787 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 SMAD3P84022 425 aaKnown RBP14.84□□□□□ -0.03
LTBR-208ENST00000541005 PPFIA1Q13136 1202 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 TRIM29Q14134 588 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 FAM160B1Q5W0V3 765 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 KRT40Q6A162 431 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 MIS18BP1Q6P0N0 1132 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 PIK3AP1Q6ZUJ8 805 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 RPAINQ86UA6 219 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 CCDC60Q8IWA6 550 aaPredicted RBP14.84□□□□□ -0.03
LTBR-208ENST00000541005 NAP1L4Q99733 375 aaKnown RBP14.84□□□□□ -0.03
LTBR-208ENST00000541005 TCEAL9Q9UHQ7 104 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 IGSF9BQ9UPX0 1349 aa14.84□□□□□ -0.03
LTBR-208ENST00000541005 LAMA2P24043 3122 aaKnown RBP14.83□□□□□ -0.03
LTBR-208ENST00000541005 RRN3P2A6NIE6 340 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 WDR64B1ANS9 1081 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 SLC37A4O43826 429 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 GAS7O60861 476 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 PSMD10O75832 226 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 CXCL10P02778 98 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 MARK3P27448 753 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 NR5A1Q13285 461 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 GPNMBQ14956 572 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 GRIK4Q16099 956 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 EARS2Q5JPH6 523 aaKnown RBP14.83□□□□□ -0.04
LTBR-208ENST00000541005 LRCH2Q5VUJ6 765 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 TAF2Q6P1X5 1199 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 B3GNT9Q6UX72 402 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 RDM1Q8NG50 284 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.04
LTBR-208ENST00000541005 TEKT3Q9BXF9 490 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 MTIF3Q9H2K0 278 aaKnown RBP14.83□□□□□ -0.04
LTBR-208ENST00000541005 KCNMB3Q9NPA1 279 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 DDX25Q9UHL0 483 aaKnown RBP14.83□□□□□ -0.04
LTBR-208ENST00000541005 PCDHA10Q9Y5I2 948 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 COL1A2P08123 1366 aa14.83□□□□□ -0.04
LTBR-208ENST00000541005 CD2BP2O95400 341 aaKnown RBP14.82□□□□□ -0.04
LTBR-208ENST00000541005 FGBP02675 491 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 PSAPP07602 524 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 SFNP31947 248 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 JAK3P52333 1124 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 MBTPS1Q14703 1052 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 LETM2Q2VYF4 491 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 MARCH8Q5T0T0 291 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 ZNF618Q5T7W0 954 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 FAM109BQ6ICB4 259 aaPredicted RBP14.82□□□□□ -0.04
LTBR-208ENST00000541005 DIS3L2Q8IYB7 885 aaKnown RBP14.82□□□□□ -0.04
LTBR-208ENST00000541005 ATP8B4Q8TF62 1192 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 C8orf76Q96K31 380 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 ZNF302Q9NR11 478 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 TUBE1Q9UJT0 475 aa14.82□□□□□ -0.04
LTBR-208ENST00000541005 MAFBQ9Y5Q3 323 aaPredicted RBP14.82□□□□□ -0.04
LTBR-208ENST00000541005 POTEB3A0JP26 581 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 FAM205CA6NFA0 338 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 BTBD18B2RXH4 712 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 BACH1O14867 736 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 TBX3O15119 743 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 NBNO60934 754 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 RPLP2P05387 115 aaKnown RBP14.81□□□□□ -0.04
LTBR-208ENST00000541005 INSRRP14616 1297 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 THPOP40225 353 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 FAM26DQ5JW98 314 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 PDXDC2PQ6P474 469 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 POTEBQ6S5H4 581 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 DEFB128Q7Z7B8 93 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 FBXO18Q8NFZ0 1043 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 FAM20AQ96MK3 541 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 UIMC1Q96RL1 719 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 UNC45AQ9H3U1 944 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 CXXC1Q9P0U4 656 aaPredicted RBP14.81□□□□□ -0.04
LTBR-208ENST00000541005 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
LTBR-208ENST00000541005 TTC3P53804 2025 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.8□□□□□ -0.04
LTBR-208ENST00000541005 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms