RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 GRM6O15303 877 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 NBNO60934 754 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 TOP1P11387 765 aaKnown RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 SMPD1P17405 629 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 NTRK3Q16288 839 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 RILPL1Q5EBL4 403 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 ARMCX2Q7L311 632 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 FERMT3Q86UX7 667 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 TEX2Q8IWB9 1127 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 ZNF713Q8N859 430 aaPredicted RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 PHF7Q9BWX1 381 aaPredicted RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 SLC26A6Q9BXS9 759 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 SEZ6LQ9BYH1 1024 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 HOOK1Q9UJC3 728 aaKnown RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 SYNPO2Q9UMS6 1093 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 NOL7Q9UMY1 257 aaKnown RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 INSL6Q9Y581 213 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 MORC2Q9Y6X9 1032 aaPredicted RBP9.52□□□□□ -0.89
CHD4-208ENST00000540960 LAMA4Q16363 1823 aa9.52□□□□□ -0.89
CHD4-208ENST00000540960 FANCMQ8IYD8 2048 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 FDPSP14324 419 aaKnown RBP9.51□□□□□ -0.89
CHD4-208ENST00000540960 SP100P23497 879 aaPredicted RBP9.51□□□□□ -0.89
CHD4-208ENST00000540960 U2AF2P26368 475 aaKnown RBP eCLIP9.51□□□□□ -0.892e-8■□□□□ 10.4
CHD4-208ENST00000540960 TRAPPC10P48553 1259 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 NDUFV1P49821 464 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 HTRA4P83105 476 aaPredicted RBP9.51□□□□□ -0.89
CHD4-208ENST00000540960 TRAF1Q13077 416 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 STK38Q15208 465 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 CERKLQ49MI3 558 aaPredicted RBP9.51□□□□□ -0.89
CHD4-208ENST00000540960 CNKSR3Q6P9H4 555 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 LRSAM1Q6UWE0 723 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 CCDC144CPQ8IYA2 1237 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 KREMEN2Q8NCW0 462 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 REPS2Q8NFH8 660 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 CCDC148Q8NFR7 591 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 BICD2Q8TD16 824 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 RUBCNQ92622 972 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 PYM1Q9BRP8 204 aaKnown RBP9.51□□□□□ -0.89
CHD4-208ENST00000540960 PDGFCQ9NRA1 345 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 SERPINB13Q9UIV8 391 aa9.51□□□□□ -0.89
CHD4-208ENST00000540960 ZNF214Q9UL59 606 aaPredicted RBP9.51□□□□□ -0.89
CHD4-208ENST00000540960 SCN10AQ9Y5Y9 1956 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 PPP6R2O75170 966 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 MMP1P03956 469 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 CCDC192P0DO97 292 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 ME1P48163 572 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 NASPP49321 788 aaPredicted RBP9.5□□□□□ -0.89
CHD4-208ENST00000540960 CDK8P49336 464 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 TROAPQ12815 778 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 COASYQ13057 564 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 ZRSR1Q15695 479 aaKnown RBP9.5□□□□□ -0.89
CHD4-208ENST00000540960 UVSSAQ2YD98 709 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 FAM47CQ5HY64 1035 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 CWF19L1Q69YN2 538 aaKnown RBP9.5□□□□□ -0.89
CHD4-208ENST00000540960 ADALQ6DHV7 355 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 RCSD1Q6JBY9 416 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 TMTC3Q6ZXV5 915 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
CHD4-208ENST00000540960 ZBTB33Q86T24 672 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 FBXO11Q86XK2 927 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 SIAH1Q8IUQ4 282 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 PNMA1Q8ND90 353 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 GPT2Q8TD30 523 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 AP5M1Q9H0R1 490 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 GLT8D2Q9H1C3 349 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 TSPY26PQ9H489 355 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 GRPEL1Q9HAV7 217 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 GPHNQ9NQX3 736 aaPredicted RBP9.5□□□□□ -0.89
CHD4-208ENST00000540960 IGSF5Q9NSI5 407 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 BARX2Q9UMQ3 279 aaPredicted RBP9.5□□□□□ -0.89
CHD4-208ENST00000540960 MYO5AQ9Y4I1 1855 aaKnown RBP9.5□□□□□ -0.89
CHD4-208ENST00000540960 PLIN4Q96Q06 1357 aa9.5□□□□□ -0.89
CHD4-208ENST00000540960 ABHD14A-ACY1A0A1B0GW23 586 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 VWA5AO00534 786 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 KINO60870 393 aaKnown RBP9.49□□□□□ -0.89
CHD4-208ENST00000540960 LGR5O75473 907 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 CDC27P30260 824 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 SHMT1P34896 483 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 CLCN5P51795 746 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 RBM10P98175 930 aaKnown RBP9.49□□□□□ -0.89
CHD4-208ENST00000540960 EVX2Q03828 476 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 DMWDQ09019 674 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 CAMK1Q14012 370 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 GRM4Q14833 912 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 FOXD4L6Q3SYB3 417 aaPredicted RBP9.49□□□□□ -0.89
CHD4-208ENST00000540960 ASPRV1Q53RT3 343 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 FOXD4L3Q6VB84 417 aaPredicted RBP9.49□□□□□ -0.89
CHD4-208ENST00000540960 ADGRD2Q7Z7M1 963 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 CLEC10AQ8IUN9 316 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 NOSTRINQ8IVI9 506 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 CCDC105Q8IYK2 499 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 CTAGE1Q96RT6 745 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 ZKSCAN3Q9BRR0 538 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 NUP62CLQ9H1M0 184 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 SEMA4AQ9H3S1 761 aa9.49□□□□□ -0.89
CHD4-208ENST00000540960 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms