RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MICALL1Q8N3F8 863 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 NECAB3Q96P71 396 aaPredicted RBP18.88■□□□□ 0.61
UBC-208ENST00000540700 ZNF577Q9BSK1 485 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 ZSCAN16Q9H4T2 348 aaPredicted RBP18.88■□□□□ 0.61
UBC-208ENST00000540700 CLIC4Q9Y696 253 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 ELP1O95163 1332 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 MROH7Q68CQ1 1323 aa18.88■□□□□ 0.61
UBC-208ENST00000540700 DDX39AO00148 427 aaKnown RBP18.87■□□□□ 0.61
UBC-208ENST00000540700 MAFGO15525 162 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 NEMFO60524 1076 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 PSMD10O75832 226 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 NFASCO94856 1347 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 CYP2C18P33260 490 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 CDK7P50613 346 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 NKX3-2P78367 333 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 RAB30Q15771 203 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 KCNV1Q6PIU1 500 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 B3GNT9Q6UX72 402 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 AFG1LQ8WV93 481 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 EMID1Q96A84 441 aaPredicted RBP18.87■□□□□ 0.61
UBC-208ENST00000540700 CDHR1Q96JP9 859 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 USP28Q96RU2 1077 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 CXXC1Q9P0U4 656 aaPredicted RBP18.87■□□□□ 0.61
UBC-208ENST00000540700 VAV3Q9UKW4 847 aa18.87■□□□□ 0.61
UBC-208ENST00000540700 A0A0U1RQG5 324 aaPredicted RBP18.86■□□□□ 0.61
UBC-208ENST00000540700 ARVCFO00192 962 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 NKRFO15226 690 aaKnown RBP eCLIP18.86■□□□□ 0.61
UBC-208ENST00000540700 GH1P01241 217 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 SP4Q02446 784 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 PTPAQ15257 358 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 IL17AQ16552 155 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 GNASQ5JWF2 1037 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 METTL7BQ6UX53 244 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 DHX37Q8IY37 1157 aaKnown RBP18.86■□□□□ 0.61
UBC-208ENST00000540700 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
UBC-208ENST00000540700 NAP1L4Q99733 375 aaKnown RBP18.86■□□□□ 0.61
UBC-208ENST00000540700 SLC28A3Q9HAS3 691 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 SPC25Q9HBM1 224 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
UBC-208ENST00000540700 Q9Y3F1 56 aa18.86■□□□□ 0.61
UBC-208ENST00000540700 MYH15Q9Y2K3 1946 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 GSTTP1A0A1W2PQM5 241 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 TLR3O15455 904 aaKnown RBP18.85■□□□□ 0.61
UBC-208ENST00000540700 PDIA4P13667 645 aaKnown RBP18.85■□□□□ 0.61
UBC-208ENST00000540700 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 PTGDRQ13258 359 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 NEDD9Q14511 834 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 SF3A1Q15459 793 aaKnown RBP18.85■□□□□ 0.61
UBC-208ENST00000540700 CALCRLQ16602 461 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 FAM126BQ8IXS8 530 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 GPR20Q99678 358 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 UNC45AQ9H3U1 944 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 IL23AQ9NPF7 189 aa18.85■□□□□ 0.61
UBC-208ENST00000540700 YBX2Q9Y2T7 364 aaKnown RBP18.85■□□□□ 0.61
UBC-208ENST00000540700 XIRP2A4UGR9 3374 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 A6NJR5 290 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 FGBP02675 491 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 MMP3P08254 477 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 CST5P28325 142 aaPredicted RBP18.84■□□□□ 0.61
UBC-208ENST00000540700 DNM1Q05193 864 aaKnown RBP18.84■□□□□ 0.61
UBC-208ENST00000540700 ORC2Q13416 577 aaPredicted RBP18.84■□□□□ 0.61
UBC-208ENST00000540700 LAMC2Q13753 1193 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 LRCH2Q5VUJ6 765 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 HERVK_113Q902F9 699 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 SPATA33Q96N06 139 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 MLXIPQ9HAP2 919 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 JPH1Q9HDC5 661 aaPredicted RBP18.84■□□□□ 0.61
UBC-208ENST00000540700 SLC9A2Q9UBY0 812 aa18.84■□□□□ 0.61
UBC-208ENST00000540700 EML1O00423 815 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 TBX3O15119 743 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 OR52Z1P0C646 297 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 HOXD8P13378 290 aaPredicted RBP18.83■□□□□ 0.6
UBC-208ENST00000540700 RABGGTBP53611 331 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.6
UBC-208ENST00000540700 CEBPZQ03701 1054 aaKnown RBP18.83■□□□□ 0.6
UBC-208ENST00000540700 GRIN1Q05586 938 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 FSCN1Q16658 493 aaKnown RBP18.83■□□□□ 0.6
UBC-208ENST00000540700 OTOP2Q7RTS6 562 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 PPTC7Q8NI37 304 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 FAM20AQ96MK3 541 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 PCYT2Q99447 389 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 RIT2Q99578 217 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 SDF4Q9BRK5 362 aa18.83■□□□□ 0.6
UBC-208ENST00000540700 TSPYL2Q9H2G4 693 aaPredicted RBP18.83■□□□□ 0.6
UBC-208ENST00000540700 MTIF3Q9H2K0 278 aaKnown RBP18.83■□□□□ 0.6
UBC-208ENST00000540700 TFIP11Q9UBB9 837 aaKnown RBP18.83■□□□□ 0.6
UBC-208ENST00000540700 UMODL1Q5DID0 1318 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 CHMP2AO43633 222 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 GAS7O60861 476 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 TXKP42681 527 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 ACTR2P61160 394 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 NUCB2P80303 420 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 TFF2Q03403 129 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 TEKT3Q9BXF9 490 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 AP5M1Q9H0R1 490 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 TBC1D22BQ9NU19 505 aa18.82■□□□□ 0.6
UBC-208ENST00000540700 CIZ1Q9ULV3 898 aaPredicted RBP18.82■□□□□ 0.6
UBC-208ENST00000540700 ATG7O95352 703 aa18.81■□□□□ 0.6
UBC-208ENST00000540700 MYOGP15173 224 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms