RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 FAM117BQ6P1L5 589 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 KAT2BQ92831 832 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 PBXIP1Q96AQ6 731 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 C17orf80Q9BSJ5 609 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 ZBED2Q9BTP6 218 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 MRVI1Q9Y6F6 885 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 PTPRZ1P23471 2315 aaPredicted RBP13.03□□□□□ -0.32
TMEM258-205ENST00000540434 MYO7AQ13402 2215 aa13.03□□□□□ -0.32
TMEM258-205ENST00000540434 PLXNA3P51805 1871 aa13.02□□□□□ -0.32
TMEM258-205ENST00000540434 LINC01553A4QN01 128 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 B4DLN1 442 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 FAM86B1E9PN63 330 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 hCG_1984214I3L0E3 225 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 DEXIO95424 95 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 GGPS1O95749 300 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 MYL3P08590 195 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 FAM86B2P0C5J1 330 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 FOSBP53539 338 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 ERVK-21P61565 698 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 EARS2Q5JPH6 523 aaKnown RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 CELF3Q5SZQ8 465 aaKnown RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 ASCL5Q7RTU5 278 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 RNF135Q8IUD6 432 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 ADHFE1Q8IWW8 467 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 ZNF713Q8N859 430 aaPredicted RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 ATOH1Q92858 354 aaPredicted RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 PKD2L1Q9P0L9 805 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
TMEM258-205ENST00000540434 LIMCH1Q9UPQ0 1083 aa13.02□□□□□ -0.33
TMEM258-205ENST00000540434 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 TMEM221A6NGB7 291 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 SPDYE3A6NKU9 549 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 M0R296 226 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 NKRFO15226 690 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM258-205ENST00000540434 BAIAP3O94812 1187 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 GH1P01241 217 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 MMP3P08254 477 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 KCNA2P16389 499 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 SREBF1P36956 1147 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 KCNJ6P48051 423 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 VCPP55072 806 aaKnown RBP13.01□□□□□ -0.33
TMEM258-205ENST00000540434 HIC1Q14526 733 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
TMEM258-205ENST00000540434 HERC4Q5GLZ8 1057 aaPredicted RBP13.01□□□□□ -0.33
TMEM258-205ENST00000540434 CYFIP1Q7L576 1253 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 EDAQ92838 391 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 MXRA8Q9BRK3 442 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 PHF20Q9BVI0 1012 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 C6orf50Q9HD87 102 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 JADE2Q9NQC1 790 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 POLR3EQ9NVU0 708 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 KMT2EQ8IZD2 1858 aa13.01□□□□□ -0.33
TMEM258-205ENST00000540434 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 STK36Q9NRP7 1315 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 IGLV3-22A0A075B6J6 115 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 H0Y858 1186 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 NLRP5P59047 1200 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 ARHGAP4P98171 946 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 ITGB3BPQ13352 177 aaPredicted RBP13□□□□□ -0.33
TMEM258-205ENST00000540434 RABEP1Q15276 862 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 DHX37Q8IY37 1157 aaKnown RBP13□□□□□ -0.33
TMEM258-205ENST00000540434 TRIM22Q8IYM9 498 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 RETREG2Q8NC44 543 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 EMID1Q96A84 441 aaPredicted RBP13□□□□□ -0.33
TMEM258-205ENST00000540434 CTAGE1Q96RT6 745 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 MTG1Q9BT17 334 aaPredicted RBP13□□□□□ -0.33
TMEM258-205ENST00000540434 SH3GLB2Q9NR46 395 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 TLR9Q9NR96 1032 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 PRKAG3Q9UGI9 489 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
TMEM258-205ENST00000540434 MEIS1O00470 390 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 FIBPO43427 364 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 FOSP01100 380 aaPredicted RBP12.99□□□□□ -0.33
TMEM258-205ENST00000540434 ZNF286BP0CG31 522 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 TGFB3P10600 412 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
TMEM258-205ENST00000540434 AP3B2Q13367 1082 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 LAMC2Q13753 1193 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 FAM47CQ5HY64 1035 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 XRRA1Q6P2D8 792 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 NFRKBQ6P4R8 1299 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 BMP8AQ7Z5Y6 402 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 BLIDQ8IZY5 108 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 REXO1Q8N1G1 1221 aaKnown RBP12.99□□□□□ -0.33
TMEM258-205ENST00000540434 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
TMEM258-205ENST00000540434 GJA10Q969M2 543 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms