RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 MBLAC1A4D2B0 266 aaPredicted RBP16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 MTMR1Q13613 665 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 CLUL1Q15846 466 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 HEATR3Q7Z4Q2 680 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 GIMAP8Q8ND71 665 aaPredicted RBP16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 CYP2W1Q8TAV3 490 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 PABPC5Q96DU9 382 aaKnown RBP16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 FAM49AQ9H0Q0 323 aaPredicted RBP16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 CLDND1Q9NY35 253 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 ERAP1Q9NZ08 941 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 HCN4Q9Y3Q4 1203 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 ADGRA3Q8IWK6 1321 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 TRIOO75962 3097 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 MUC6Q6W4X9 2439 aa16.34■□□□□ 0.21
SEMA4D-222ENST00000540183 CD52P31358 61 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 LTBRP36941 435 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 GNAQP50148 359 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 DLX2Q07687 328 aaPredicted RBP16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 COL19A1Q14993 1142 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 CREB3L3Q68CJ9 461 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 TYW1BQ6NUM6 668 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 TAF2Q6P1X5 1199 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 SKAP1Q86WV1 359 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 MICU3Q86XE3 530 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
SEMA4D-222ENST00000540183 SPDYE3A6NKU9 549 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 C5orf67F2Z3F1 127 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 INSRRP14616 1297 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 BMPR1AP36894 532 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 MRPS6P82932 125 aaKnown RBP16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 HYAL1Q12794 435 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 FANCBQ8NB91 859 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 ZNF689Q96CS4 500 aaPredicted RBP16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 CDHR1Q96JP9 859 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 ESYT1Q9BSJ8 1104 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 MTA3Q9BTC8 594 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 SMARCAD1Q9H4L7 1026 aa16.32■□□□□ 0.2
SEMA4D-222ENST00000540183 CNTNAP5Q8WYK1 1306 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 POTEB3A0JP26 581 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 LINC01565O15544 149 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 CALM1P0DP23 149 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 CALM2P0DP24 149 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 CALM3P0DP25 149 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 ARP10275 920 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 LIFRP42702 1097 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 BTG3Q14201 252 aaPredicted RBP16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 PLCB4Q15147 1175 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 POTEBQ6S5H4 581 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 TSHZ1Q6ZSZ6 1077 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 RSPH3Q86UC2 560 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 TMTC2Q8N394 836 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 IGFLR1Q9H665 355 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 JPH1Q9HDC5 661 aaPredicted RBP16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 ALG13Q9NP73 1137 aaKnown RBP16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 MRPL42Q9Y6G3 142 aaKnown RBP16.31■□□□□ 0.2
SEMA4D-222ENST00000540183 DGKIO75912 1065 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 IBSPP21815 317 aaPredicted RBP16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 DNAJB1P25685 340 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 GATMP50440 423 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 ZP2Q05996 745 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 ITGB3BPQ13352 177 aaPredicted RBP16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 CAMK1Q14012 370 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 PAN2Q504Q3 1202 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 CLP1Q92989 425 aaKnown RBP16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 MXRA8Q9BRK3 442 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 C11orf84Q9BUA3 381 aaPredicted RBP16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 KCNH7Q9NS40 1196 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 SLC9A2Q9UBY0 812 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 TRPC6Q9Y210 931 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 WDFY4Q6ZS81 3184 aa16.3■□□□□ 0.2
SEMA4D-222ENST00000540183 TBX10O75333 385 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 RB1P06400 928 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 ACTR2P61160 394 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 CTC1Q2NKJ3 1217 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 CRIPAKQ8N1N5 446 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 ANO2Q9NQ90 1003 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 TRPV2Q9Y5S1 764 aa16.29■□□□□ 0.2
SEMA4D-222ENST00000540183 RRN3P2A6NIE6 340 aa16.28■□□□□ 0.2
SEMA4D-222ENST00000540183 DDX39AO00148 427 aaKnown RBP16.28■□□□□ 0.2
SEMA4D-222ENST00000540183 ADAMTS3O15072 1205 aa16.28■□□□□ 0.2
SEMA4D-222ENST00000540183 ADGRD2Q7Z7M1 963 aa16.28■□□□□ 0.2
SEMA4D-222ENST00000540183 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms