RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 BICD1Q96G01 975 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 PARVBQ9HBI1 364 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 ANGPTL2Q9UKU9 493 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 SCINQ9Y6U3 715 aa6.58□□□□□ -1.36
PTPRD-214ENST00000540109 DDX60LQ5H9U9 1706 aaKnown RBP6.58□□□□□ -1.36
PTPRD-214ENST00000540109 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 SPECC1L-ADORA2AF8WAN1 911 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 DIAPH2O60879 1101 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 DHX9Q08211 1270 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 CALCOCO2Q13137 446 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 C11orf57Q6ZUT1 292 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 USP37Q86T82 979 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 BLIDQ8IZY5 108 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 SLF1Q9BQI6 1058 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 EHD4Q9H223 541 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 QTRT2Q9H974 415 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 TFCP2L1Q9NZI6 479 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 TCEAL9Q9UHQ7 104 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 V9GY48 417 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 MYH6P13533 1939 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 SFI1A8K8P3 1242 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 SART1O43290 800 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 TFAP4Q01664 338 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 KLHL7Q8IXQ5 586 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 ANKRD42Q8N9B4 389 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC42Q96M95 316 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC43Q96MW1 224 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 RTFDC1Q9BY42 306 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 ZBTB21Q9ULJ3 1066 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 TARSL2A2RTX5 802 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 DNAJC6O75061 913 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 PARP1P09874 1014 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 CTNNA1P35221 906 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 BTDP43251 543 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 ESRRGP62508 458 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 GPSM2P81274 684 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 GJC2Q5T442 439 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 SYCP2LQ5T4T6 812 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 ARHGAP22Q7Z5H3 698 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 CCDC144CPQ8IYA2 1237 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 A1CFQ9NQ94 594 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 HOMER2Q9NSB8 354 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 MCM8Q9UJA3 840 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 PARP3Q9Y6F1 533 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 PRDX5P30044 214 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 NNTQ13423 1086 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 PPP1R14CQ8TAE6 165 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 GRAMD1AQ96CP6 724 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 DHX36Q9H2U1 1008 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 IL1RAPL1Q9NZN1 696 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 LTBP1Q14766 1721 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 ANO9A1A5B4 782 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 SUPT3HO75486 399 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 S100BP04271 92 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 NOVP48745 357 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 PKN1Q16512 942 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 TBC1D16Q8TBP0 767 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 MYL10Q9BUA6 226 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 CABP5Q9NP86 173 aa6.57□□□□□ -1.36
PTPRD-214ENST00000540109 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.57□□□□□ -1.36
PTPRD-214ENST00000540109 FAM170AA1A519 330 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 GTPBP6O43824 516 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 ESRRBO95718 433 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 RXRAP19793 462 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 MAN1A1P33908 653 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 TMED10P49755 219 aaKnown RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 UBXN1Q04323 297 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 IKQ13123 557 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 INAQ16352 499 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 RRAGBQ5VZM2 374 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 PPP1R21Q6ZMI0 780 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 TRIM74Q86UV6 250 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 TRIM73Q86UV7 250 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 TNFRSF25Q93038 417 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 FTOQ9C0B1 505 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 ZC3H12CQ9C0D7 883 aaKnown RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 KCNF1Q9H3M0 494 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 SYNCQ9H7C4 482 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 G3V3G9 751 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 HSPA9P38646 679 aaKnown RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 CTCFP49711 727 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 PAPOLAP51003 745 aaKnown RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 MORC3Q14149 939 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 DCAF8Q5TAQ9 597 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 GPIHBP1Q8IV16 184 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 SPATA20Q8TB22 786 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 ZKSCAN3Q9BRR0 538 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 CHMP2BQ9UQN3 213 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 CHMP2AO43633 222 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 GGCXP38435 758 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 PLA2G4AP47712 749 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 IFNAR2P48551 515 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 NOP14P78316 857 aaKnown RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 MFSD14BQ5SR56 506 aa6.56□□□□□ -1.36
PTPRD-214ENST00000540109 GPATCH4Q5T3I0 446 aaKnown RBP6.56□□□□□ -1.36
PTPRD-214ENST00000540109 ZNF449Q6P9G9 518 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms