RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 GTF2F1P35269 517 aaKnown RBP eCLIP22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 MRE11P49959 708 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 NHLH1Q02575 133 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 ADAM15Q13444 863 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 SMAD4Q13485 552 aaKnown RBP22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 HERC4Q5GLZ8 1057 aaPredicted RBP22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 TTC22Q5TAA0 569 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 HFE2Q6ZVN8 426 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 RTN4RL1Q86UN2 441 aaPredicted RBP22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 CTCFLQ8NI51 663 aaPredicted RBP22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 GLG1Q92896 1179 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 P2RX5Q93086 422 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 LZTS2Q9BRK4 669 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 SMARCAD1Q9H4L7 1026 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 IGFLR1Q9H665 355 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 AGO3Q9H9G7 860 aaKnown RBP22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 ALG13Q9NP73 1137 aaKnown RBP22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 SQORQ9Y6N5 450 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 NLRC5Q86WI3 1866 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 TTC3P53804 2025 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 TBX10O75333 385 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 DDAH1O94760 285 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 RPLP2P05387 115 aaKnown RBP22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 CHMLP26374 656 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 KIF5BP33176 963 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 NAALADL2Q58DX5 795 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 MB21D2Q8IYB1 491 aaPredicted RBP22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 ZNF654Q8IZM8 581 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 EXOC6Q8TAG9 804 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 LINC01599Q8WXQ3 324 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 PSTPIP2Q9H939 334 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 SEC63Q9UGP8 760 aaKnown RBP22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 CD207Q9UJ71 328 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 UBIAD1Q9Y5Z9 338 aa22.93■■□□□ 1.26
LPCAT3-210ENST00000540090 RRN3P2A6NIE6 340 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 MAFGO15525 162 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 LINC01565O15544 149 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 PDE4AP27815 886 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 MRPS6P82932 125 aaKnown RBP22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 RNF135Q8IUD6 432 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 MFSD14AQ96MC6 490 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 MYL10Q9BUA6 226 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 FTHL17Q9BXU8 183 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 LY9Q9HBG7 655 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 MUTYHQ9UIF7 546 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 MRPL42Q9Y6G3 142 aaKnown RBP22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 DOCK5Q9H7D0 1870 aa22.92■■□□□ 1.26
LPCAT3-210ENST00000540090 TRIOO75962 3097 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 KAT6AQ92794 2004 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 EYA4O95677 639 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 INSRRP14616 1297 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 CD52P31358 61 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 GNAQP50148 359 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 IER5Q5VY09 327 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 CMTR2Q8IYT2 770 aaKnown RBP22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 SRBD1Q8N5C6 995 aaKnown RBP22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 SPPL3Q8TCT6 385 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 MSLNLQ96KJ4 702 aa22.91■■□□□ 1.26
LPCAT3-210ENST00000540090 STXBP3O00186 592 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 ITGB1P05556 798 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 DNAJB1P25685 340 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 IGBP1P78318 339 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 MTMR1Q13613 665 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 NPAS4Q8IUM7 802 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 MAP4K1Q92918 833 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 PPP2R3CQ969Q6 453 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 PCYT2Q99447 389 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 MTA3Q9BTC8 594 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 JADE2Q9NQC1 790 aa22.9■■□□□ 1.26
LPCAT3-210ENST00000540090 SGSM2O43147 1006 aa22.89■■□□□ 1.25
LPCAT3-210ENST00000540090 CSPG5O95196 566 aa22.89■■□□□ 1.25
LPCAT3-210ENST00000540090 PLEKHA8P1O95397 391 aa22.89■■□□□ 1.25
LPCAT3-210ENST00000540090 EDAQ92838 391 aa22.89■■□□□ 1.25
LPCAT3-210ENST00000540090 ZBTB10Q96DT7 871 aa22.89■■□□□ 1.25
LPCAT3-210ENST00000540090 FAM49AQ9H0Q0 323 aaPredicted RBP22.89■■□□□ 1.25
LPCAT3-210ENST00000540090 PKD2L1Q9P0L9 805 aa22.89■■□□□ 1.25
LPCAT3-210ENST00000540090 NDUFV1P49821 464 aa22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 TMTC2Q8N394 836 aa22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 EFHBQ8N7U6 833 aa22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 KLHL23Q8NBE8 558 aa22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 TNPO1Q92973 898 aaKnown RBP22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 CLEC1BQ9P126 229 aa22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 PADI3Q9ULW8 664 aa22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 TRPV2Q9Y5S1 764 aa22.88■■□□□ 1.25
LPCAT3-210ENST00000540090 STAG3L1P0CL83 205 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 UBE2SQ16763 222 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 BMP8AQ7Z5Y6 402 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 ADGRD2Q7Z7M1 963 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 CMTR1Q8N1G2 835 aaKnown RBP22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 JPH1Q9HDC5 661 aaPredicted RBP22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 PCDHA6Q9UN73 950 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 PCDHA8Q9Y5H6 950 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 PCDHA2Q9Y5H9 948 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 ZNF318Q5VUA4 2279 aa22.87■■□□□ 1.25
LPCAT3-210ENST00000540090 IGSF9BQ9UPX0 1349 aa22.86■■□□□ 1.25
LPCAT3-210ENST00000540090 SPDYE3A6NKU9 549 aa22.86■■□□□ 1.25
LPCAT3-210ENST00000540090 COASYQ13057 564 aa22.86■■□□□ 1.25
LPCAT3-210ENST00000540090 CASC1Q6TDU7 716 aa22.86■■□□□ 1.25
LPCAT3-210ENST00000540090 PLPPR4Q7Z2D5 763 aa22.86■■□□□ 1.25
LPCAT3-210ENST00000540090 SMRP1Q8NCR6 262 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms