RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 LMBR1Q8WVP7 490 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
RAB40C-205ENST00000539661 KIF13BQ9NQT8 1826 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 ESYT2A0FGR8 921 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 F8VZ95 297 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 SMARCA1P28370 1054 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 KRT71Q3SY84 523 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 FAM133AQ8N9E0 248 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 CCDC197Q8NCU1 140 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 FAM129AQ9BZQ8 928 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 CCT8L1PA6NM43 557 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 KLRF2D3W0D1 207 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 KRIT1O00522 736 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 TRIM37O94972 964 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 DDB1Q16531 1140 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 ZNF622Q969S3 477 aaKnown RBP eCLIP19.22■□□□□ 0.67
RAB40C-205ENST00000539661 XPO6Q96QU8 1125 aaKnown RBP19.22■□□□□ 0.67
RAB40C-205ENST00000539661 MYH7BA7E2Y1 1941 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 ITIH4Q14624 930 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 LRRC41Q15345 812 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 KRT79Q5XKE5 535 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 CRELD2Q6UXH1 353 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-205ENST00000539661 HOOK3Q86VS8 718 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 ANKS4BQ8N8V4 417 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 SUCLA2Q9P2R7 463 aaPredicted RBP19.22■□□□□ 0.67
RAB40C-205ENST00000539661 COL4A1P02462 1669 aa19.22■□□□□ 0.67
RAB40C-205ENST00000539661 ASAP2O43150 1006 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 PPFIA2O75334 1257 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 SSBP05455 408 aaKnown RBP eCLIP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 SCP2P22307 547 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 ELF3P78545 371 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 COASYQ13057 564 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 SLFN11Q7Z7L1 901 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 REXO1Q8N1G1 1221 aaKnown RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 METTL13Q8N6R0 699 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 DDX47Q9H0S4 455 aaKnown RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 A0A0A6YYK5 440 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 F8W031 263 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 DAPK3O43293 454 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 USP17L8P0C7I0 530 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 TSPY3P0CV98 308 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 TSPY8P0CW00 308 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 SLC8A3P57103 927 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 RIPK1Q13546 671 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 FAM98CQ17RN3 349 aaKnown RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 ZC3H3Q8IXZ2 948 aaKnown RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 SYCE1Q8N0S2 351 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 TMEM47Q9BQJ4 181 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 AP1M1Q9BXS5 423 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 MKNK2Q9HBH9 465 aa19.21■□□□□ 0.67
RAB40C-205ENST00000539661 UTP11Q9Y3A2 253 aaKnown RBP19.21■□□□□ 0.67
RAB40C-205ENST00000539661 PHF20L1A8MW92 1017 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 CAMTA2O94983 1202 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 ATP6V1G2O95670 118 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 FLT3P36888 993 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 ARID5AQ03989 594 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 DHX9Q08211 1270 aaKnown RBP19.21■□□□□ 0.66
RAB40C-205ENST00000539661 FAM26FQ5R3K3 315 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 SLC51AQ86UW1 340 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 TPCN2Q8NHX9 752 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 SNX29Q8TEQ0 813 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 DNAJC19Q96DA6 116 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 HOOK2Q96ED9 719 aa19.21■□□□□ 0.66
RAB40C-205ENST00000539661 TTC7AQ9ULT0 858 aaPredicted RBP19.21■□□□□ 0.66
RAB40C-205ENST00000539661 hCG_1984214I3L0E3 225 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 NPEPPSP55786 919 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 PTK2Q05397 1052 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 IRF2BP2Q7Z5L9 587 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 FMNL3Q8IVF7 1028 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 ZNF713Q8N859 430 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-205ENST00000539661 GLIS3Q8NEA6 775 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 TXLNGYQ9BZA5 131 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
RAB40C-205ENST00000539661 INTUQ9ULD6 942 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 STXBP5LQ9Y2K9 1186 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 COL16A1Q07092 1604 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-205ENST00000539661 USP17L3A6NCW0 530 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 USP17L4A6NCW7 530 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 EPS15P42566 896 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 PPP2R5EQ16537 467 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 USP17L1Q7RTZ2 530 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 CCHCR1Q8TD31 782 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 CUL5Q93034 780 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 ZNF317Q96PQ6 595 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-205ENST00000539661 RAB17Q9H0T7 212 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 NOD2Q9HC29 1040 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 NAGPAQ9UK23 515 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 MINPP1Q9UNW1 487 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 SLC12A4Q9UP95 1085 aa19.2■□□□□ 0.66
RAB40C-205ENST00000539661 NIP7Q9Y221 180 aaKnown RBP eCLIP19.2■□□□□ 0.66
RAB40C-205ENST00000539661 CFAP73A6NFT4 308 aa19.19■□□□□ 0.66
RAB40C-205ENST00000539661 PRKCIP41743 596 aa19.19■□□□□ 0.66
RAB40C-205ENST00000539661 CLNS1AP54105 237 aaKnown RBP19.19■□□□□ 0.66
RAB40C-205ENST00000539661 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
RAB40C-205ENST00000539661 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
RAB40C-205ENST00000539661 PEX26Q7Z412 305 aa19.19■□□□□ 0.66
RAB40C-205ENST00000539661 ZNF444Q8N0Y2 327 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-205ENST00000539661 BMP2KQ9NSY1 1161 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms