RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MARCH8Q5T0T0 291 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 PCYT2Q99447 389 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 SMARCAD1Q9H4L7 1026 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 UBE2ZQ9H832 354 aaPredicted RBP14.32□□□□□ -0.12
VAMP1-206ENST00000538970 RIC8AQ9NPQ8 531 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 KCNH7Q9NS40 1196 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 BRPF3Q9ULD4 1205 aa14.32□□□□□ -0.12
VAMP1-206ENST00000538970 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 ZBTB43O43298 467 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 LPIN1Q14693 890 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 RTN1Q16799 776 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 ADCK5Q3MIX3 580 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 TSGA10IPQ3SY00 556 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
VAMP1-206ENST00000538970 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
VAMP1-206ENST00000538970 RSPH3Q86UC2 560 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
VAMP1-206ENST00000538970 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 MRPL38Q96DV4 380 aaKnown RBP14.31□□□□□ -0.12
VAMP1-206ENST00000538970 PGBD1Q96JS3 809 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 FBXL18Q96ME1 805 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 MXRA8Q9BRK3 442 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 ANO3Q9BYT9 981 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 SLC9A2Q9UBY0 812 aa14.31□□□□□ -0.12
VAMP1-206ENST00000538970 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-206ENST00000538970 H3BNC9 293 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 STXBP3O00186 592 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-206ENST00000538970 ADCY7P51828 1080 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 IGBP1P78318 339 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
VAMP1-206ENST00000538970 PTPROQ16827 1216 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 FBXO47Q5MNV8 452 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 TMEM192Q8IY95 271 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 DNAJB3Q8WWF6 145 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 ZBTB10Q96DT7 871 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 RC3H2Q9HBD1 1191 aaKnown RBP14.3□□□□□ -0.12
VAMP1-206ENST00000538970 CDY2AQ9Y6F7 541 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 NFASCO94856 1347 aa14.3□□□□□ -0.12
VAMP1-206ENST00000538970 KLF18A0A0U1RQI7 1052 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 RRN3P2A6NIE6 340 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 GOLGA8AA7E2F4 631 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 GOLGA8BA8MQT2 603 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 CDC45O75419 566 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 RPLP2P05387 115 aaKnown RBP14.29□□□□□ -0.12
VAMP1-206ENST00000538970 LINC00271P0C7V0 271 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 ARP10275 920 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 INSRRP14616 1297 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 SREBF1P36956 1147 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 CLK2P49760 499 aaKnown RBP14.29□□□□□ -0.12
VAMP1-206ENST00000538970 RCAN1P53805 252 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 ACTR2P61160 394 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 MRPS6P82932 125 aaKnown RBP14.29□□□□□ -0.12
VAMP1-206ENST00000538970 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 GPM6BQ13491 265 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 KRT32Q14532 448 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 LEXMQ3ZCV2 418 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 TIGD5Q53EQ6 642 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 CEP55Q53EZ4 464 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 TSHZ1Q6ZSZ6 1077 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 IL17RAQ96F46 866 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 PHOX2BQ99453 314 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 SDF4Q9BRK5 362 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 FAM49AQ9H0Q0 323 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-206ENST00000538970 AZI2Q9H6S1 392 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 AGO4Q9HCK5 861 aaKnown RBP14.29□□□□□ -0.12
VAMP1-206ENST00000538970 FAM217BQ9NTX9 383 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-206ENST00000538970 TMEM260Q9NX78 707 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 BARHL2Q9NY43 387 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 V9GY48 417 aaPredicted RBP14.29□□□□□ -0.12
VAMP1-206ENST00000538970 ADGRA3Q8IWK6 1321 aa14.29□□□□□ -0.12
VAMP1-206ENST00000538970 SMCO2A6NFE2 343 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 KCNA5P22460 613 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 CDC27P30260 824 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 PLPPR4Q7Z2D5 763 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 FAM178BQ8IXR5 827 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 GJD3Q8N144 294 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 FIBCD1Q8N539 461 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 LINC01599Q8WXQ3 324 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 AGO3Q9H9G7 860 aaKnown RBP14.28□□□□□ -0.12
VAMP1-206ENST00000538970 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
VAMP1-206ENST00000538970 C5orf67F2Z3F1 127 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 MEIS1O00470 390 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 ENPP3O14638 875 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 CD52P31358 61 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 CTNNB1P35222 781 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 STAT5BP51692 787 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.27□□□□□ -0.13
VAMP1-206ENST00000538970 TRAPPC12Q8WVT3 735 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
VAMP1-206ENST00000538970 GLT8D2Q9H1C3 349 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 TRPV2Q9Y5S1 764 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.13
VAMP1-206ENST00000538970 BRWD1Q9NSI6 2320 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms