RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ADAMTS3	O15072	1205 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TREH	O43280	583 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	HBP1	O60381	514 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	FDPS	P14324	419 aa	Known RBP	13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SFN	P31947	248 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SP4	Q02446	784 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PPFIA1	Q13136	1202 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	GPNMB	Q14956	572 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PRR16	Q569H4	304 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ZNF618	Q5T7W0	954 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PPP4R3A	Q6IN85	833 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MIS18BP1	Q6P0N0	1132 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	CNKSR3	Q6P9H4	555 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	RSPH3	Q86UC2	560 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ZNF710	Q8N1W2	664 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	NSUN7	Q8NE18	718 aa	Known RBP	13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	RASGRP4	Q8TDF6	673 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	UPF2	Q9HAU5	1272 aa	Known RBP	13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SETD4	Q9NVD3	440 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SQOR	Q9Y6N5	450 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	COL1A2	P08123	1366 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MYO9B	Q13459	2157 aa		13.95	□□□□□ -0.18
CLTCL1-205	ENST00000538828	RSPH10B2	B2RC85	870 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TBX3	O15119	743 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	CCNE2	O96020	404 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	RSPH10B	P0C881	870 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	DNAJB2	P25686	324 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ZNF200	P98182	395 aa	Predicted RBP	13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	RABEP1	Q15276	862 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	GRIK4	Q16099	956 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	OTOP2	Q7RTS6	562 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	NME8	Q8N427	588 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SLC5A5	Q92911	643 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	BRMS1	Q9HCU9	246 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MSRA	Q9UJ68	235 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TUBE1	Q9UJT0	475 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	STXBP5L	Q9Y2K9	1186 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TELO2	Q9Y4R8	837 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PCDHA11	Q9Y5I1	949 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PCDHA10	Q9Y5I2	948 aa		13.94	□□□□□ -0.18
CLTCL1-205	ENST00000538828	CCDC194	A0A1B0GVG4	234 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	POTEB3	A0JP26	581 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	WDR64	B1ANS9	1081 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MSH4	O15457	936 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	NBN	O60934	754 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PPFIA3	O75145	1194 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PSAP	P07602	524 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	INSRR	P14616	1297 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	THPO	P40225	353 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	JAK3	P52333	1124 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	HMGN5	P82970	282 aa	Known RBP	13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PLCB4	Q15147	1175 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MARCH8	Q5T0T0	291 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	POTEB	Q6S5H4	581 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	B3GNT9	Q6UX72	402 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	DEFB128	Q7Z7B8	93 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	NEK8	Q86SG6	692 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ATP8B4	Q8TF62	1192 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PPP1R13L	Q8WUF5	828 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	APBB2	Q92870	758 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	WNT8B	Q93098	351 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	FAM20A	Q96MK3	541 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	AIFM3	Q96NN9	605 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PBX4	Q9BYU1	374 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SEMA6B	Q9H3T3	888 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ZNF302	Q9NR11	478 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PKD2L1	Q9P0L9	805 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PCDHA2	Q9Y5H9	948 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	WDR81	Q562E7	1941 aa		13.93	□□□□□ -0.18
CLTCL1-205	ENST00000538828	SMIM35	A0A1B0GVV1	85 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PSMD10	O75832	226 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	LARGE1	O95461	756 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ATP2A2	P16615	1042 aa	Known RBP	13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MKRN4P	Q13434	485 aa	Predicted RBP	13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	IKBKE	Q14164	716 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	PLEKHG4	Q58EX7	1191 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	ZNF484	Q5JVG2	852 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	USP38	Q8NB14	1042 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	BBX	Q8WY36	941 aa	Predicted RBP	13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TIFA	Q96CG3	184 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	FAM167A	Q96KS9	214 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TEKT3	Q9BXF9	490 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	KCNJ14	Q9UNX9	436 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	CEP131	Q9UPN4	1083 aa		13.92	□□□□□ -0.18
CLTCL1-205	ENST00000538828	KDM3A	Q9Y4C1	1321 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	KIF28P	B7ZC32	967 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	BACH1	O14867	736 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	GAS7	O60861	476 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MMP1	P03956	469 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	KRT2	P35908	639 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	KCNJ6	P48051	423 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MCM2	P49736	904 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	TRIM29	Q14134	588 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	MBTPS1	Q14703	1052 aa		13.91	□□□□□ -0.18
CLTCL1-205	ENST00000538828	LRCH2	Q5VUJ6	765 aa		13.91	□□□□□ -0.18

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