RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 RGL1Q9NZL6 768 aa15.83■□□□□ 0.12
CD4-208ENST00000538827 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
CD4-208ENST00000538827 HOOK1Q9UJC3 728 aaKnown RBP15.83■□□□□ 0.12
CD4-208ENST00000538827 KIAA1024Q9UPX6 916 aa15.83■□□□□ 0.12
CD4-208ENST00000538827 NR2E3Q9Y5X4 410 aa15.83■□□□□ 0.12
CD4-208ENST00000538827 PTCH2Q9Y6C5 1203 aa15.83■□□□□ 0.12
CD4-208ENST00000538827 SYCE3A1L190 88 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 NOP56O00567 594 aaKnown RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 BACH1O14867 736 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 CTAGE5O15320 804 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 FARP2O94887 1054 aaPredicted RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 SSBP05455 408 aaKnown RBP eCLIP15.82■□□□□ 0.12
CD4-208ENST00000538827 PSAPP07602 524 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 SLFN14P0C7P3 912 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 RPA1P27694 616 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 ACTR2P61160 394 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 ECM1Q16610 540 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 PRAMEF19Q5SWL8 479 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 GJC2Q5T442 439 aaPredicted RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 MFSD14CQ5VZR4 134 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 TAPT1Q6NXT6 567 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 MIS18BP1Q6P0N0 1132 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 B3GNT9Q6UX72 402 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 TPH2Q8IWU9 490 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 DHX37Q8IY37 1157 aaKnown RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 SMAP1Q8IYB5 467 aaPredicted RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 TRIB2Q92519 343 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 RAD54LQ92698 747 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 STAMQ92783 540 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 ERCC4Q92889 916 aaPredicted RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 SENP7Q9BQF6 1050 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 LXNQ9BS40 222 aa15.82■□□□□ 0.12
CD4-208ENST00000538827 POLR3CQ9BUI4 534 aaPredicted RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 DDX41Q9UJV9 622 aaKnown RBP15.82■□□□□ 0.12
CD4-208ENST00000538827 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.81■□□□□ 0.12
CD4-208ENST00000538827 GH1P01241 217 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 SUPT20HL2P0C7V6 817 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 TGFB3P10600 412 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 PTGS1P23219 599 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 PNOCQ13519 176 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 MCM6Q14566 821 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 POSTNQ15063 836 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 UGCGQ16739 394 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 HYIQ5T013 277 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 KANK3Q6NY19 840 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 METTL7BQ6UX53 244 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 KCNK18Q7Z418 384 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 CATSPER3Q86XQ3 398 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 RDM1Q8NG50 284 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 RAET1EQ8TD07 263 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 LARP4BQ92615 738 aaKnown RBP15.81■□□□□ 0.12
CD4-208ENST00000538827 CCDC43Q96MW1 224 aaKnown RBP15.81■□□□□ 0.12
CD4-208ENST00000538827 SPATA33Q96N06 139 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 CUEDC2Q9H467 287 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 MAGEF1Q9HAY2 307 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 SRRDQ9UH36 339 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 TELO2Q9Y4R8 837 aa15.81■□□□□ 0.12
CD4-208ENST00000538827 A0A087WWV3 80 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 RBM47A0AV96 593 aaKnown RBP15.8■□□□□ 0.12
CD4-208ENST00000538827 E9PMD0 336 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 P4HBP07237 508 aaKnown RBP15.8■□□□□ 0.12
CD4-208ENST00000538827 SPATA31C1P0DKV0 1188 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 XRCC5P13010 732 aaKnown RBP15.8■□□□□ 0.12
CD4-208ENST00000538827 CCDC144BQ3MJ40 725 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 NAALADL2Q58DX5 795 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 CELF3Q5SZQ8 465 aaKnown RBP15.8■□□□□ 0.12
CD4-208ENST00000538827 TMEM63BQ5T3F8 832 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 GPR153Q6NV75 609 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 CCDC62Q6P9F0 684 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 OR6J1Q8NGC5 347 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 LRRC15Q8TF66 581 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 PAGE5Q96GU1 130 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 ANP32EQ9BTT0 268 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 GABBR1Q9UBS5 961 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 PCDHA10Q9Y5I2 948 aa15.8■□□□□ 0.12
CD4-208ENST00000538827 GTPBP6O43824 516 aaPredicted RBP15.79■□□□□ 0.12
CD4-208ENST00000538827 LETM1O95202 739 aaPredicted RBP15.79■□□□□ 0.12
CD4-208ENST00000538827 ELNP15502 786 aa15.79■□□□□ 0.12
CD4-208ENST00000538827 CASP1P29466 404 aa15.79■□□□□ 0.12
CD4-208ENST00000538827 QARSP47897 775 aaKnown RBP15.79■□□□□ 0.12
CD4-208ENST00000538827 TNFAIP2Q03169 654 aa15.79■□□□□ 0.12
CD4-208ENST00000538827 ARHGAP1Q07960 439 aa15.79■□□□□ 0.12
CD4-208ENST00000538827 UTP14CQ5TAP6 766 aaKnown RBP15.79■□□□□ 0.12
CD4-208ENST00000538827 SV2BQ7L1I2 683 aa15.79■□□□□ 0.12
CD4-208ENST00000538827 TRMT1LQ7Z2T5 733 aaKnown RBP15.79■□□□□ 0.12
CD4-208ENST00000538827 TRMT44Q8IYL2 757 aaKnown RBP15.79■□□□□ 0.12
CD4-208ENST00000538827 LENG1Q96BZ8 264 aaPredicted RBP15.79■□□□□ 0.12
CD4-208ENST00000538827 BLZF1Q9H2G9 400 aa15.79■□□□□ 0.12
CD4-208ENST00000538827 DNM3Q9UQ16 869 aa15.79■□□□□ 0.12
CD4-208ENST00000538827 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 SLITRK3O94933 977 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 GNRH1P01148 92 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 PLA2G4BP0C869 781 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 ZNF865P0CJ78 1059 aaPredicted RBP15.78■□□□□ 0.12
CD4-208ENST00000538827 SMPD1P17405 629 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 PRMT2P55345 433 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 PSMC5P62195 406 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms