RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 PPP4R3CPQ6ZMV5 832 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 NELFCDQ8IXH7 590 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 LXNQ9BS40 222 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 MAF1Q9H063 256 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 KCTD10Q9H3F6 313 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 ABHD10Q9NUJ1 306 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 SPDYE16A6NNV3 312 aaPredicted RBP22.59■■□□□ 1.21
DDX55-205ENST00000538744 TRAF5O00463 557 aa22.59■■□□□ 1.21
DDX55-205ENST00000538744 IREB2P48200 963 aaKnown RBP22.59■■□□□ 1.21
DDX55-205ENST00000538744 ITGB3BPQ13352 177 aaPredicted RBP22.59■■□□□ 1.21
DDX55-205ENST00000538744 VWA3BQ502W6 1294 aa22.59■■□□□ 1.21
DDX55-205ENST00000538744 DPY19L2Q6NUT2 758 aa22.59■■□□□ 1.21
DDX55-205ENST00000538744 DLK2Q6UY11 383 aa22.59■■□□□ 1.21
DDX55-205ENST00000538744 ERGIC2Q96RQ1 377 aa22.59■■□□□ 1.21
DDX55-205ENST00000538744 NUP58Q9BVL2 599 aa22.59■■□□□ 1.21
DDX55-205ENST00000538744 KCND2Q9NZV8 630 aa22.59■■□□□ 1.21
DDX55-205ENST00000538744 GOLGA6L9A6NEM1 432 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 CCND2P30279 289 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 KRT9P35527 623 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 C1orf186Q6ZWK4 172 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 EPM2AIP1Q7L775 607 aaPredicted RBP22.58■■□□□ 1.21
DDX55-205ENST00000538744 REXO1L1PQ8IX06 675 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 RETREG2Q8NC44 543 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 BANK1Q8NDB2 785 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 ACAD9Q9H845 621 aa22.58■■□□□ 1.21
DDX55-205ENST00000538744 A0A0G2JMZ2 1700 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 RSPH10B2B2RC85 870 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 FAM13AO94988 1023 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 GNA14O95837 355 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 P4HBP07237 508 aaKnown RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 RSPH10BP0C881 870 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 SYCP1Q15431 976 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 EDRF1Q3B7T1 1238 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 TOGARAM2Q6ZUX3 1019 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 USP50Q70EL3 339 aaPredicted RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 TMTC1Q8IUR5 882 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 ZNF592Q92610 1267 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 L3MBTL3Q96JM7 780 aaPredicted RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 NDST4Q9H3R1 872 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 OLFML3Q9NRN5 406 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 WRAP73Q9P2S5 460 aaPredicted RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 CAPN11Q9UMQ6 739 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 TTC26A0AVF1 554 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 SOWAHDA6NJG2 315 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 RNF225M0QZC1 329 aaPredicted RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 CASP5P51878 434 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 ZC3H3Q8IXZ2 948 aaKnown RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 IQCDQ96DY2 449 aa22.57■■□□□ 1.2
DDX55-205ENST00000538744 LUC7L2Q9Y383 392 aaKnown RBP22.57■■□□□ 1.2
DDX55-205ENST00000538744 ZBTB39O15060 712 aa22.56■■□□□ 1.2
DDX55-205ENST00000538744 PLS1Q14651 629 aa22.56■■□□□ 1.2
DDX55-205ENST00000538744 BMT2Q1RMZ1 405 aa22.56■■□□□ 1.2
DDX55-205ENST00000538744 CCDC40Q4G0X9 1142 aa22.56■■□□□ 1.2
DDX55-205ENST00000538744 VSIG10LQ86VR7 867 aa22.56■■□□□ 1.2
DDX55-205ENST00000538744 KIF18AQ8NI77 898 aa22.56■■□□□ 1.2
DDX55-205ENST00000538744 NSUN6Q8TEA1 469 aaKnown RBP22.56■■□□□ 1.2
DDX55-205ENST00000538744 PURBQ96QR8 312 aaKnown RBP22.56■■□□□ 1.2
DDX55-205ENST00000538744 ZSWIM4Q9H7M6 989 aa22.56■■□□□ 1.2
DDX55-205ENST00000538744 MRPL44Q9H9J2 332 aaKnown RBP22.56■■□□□ 1.2
DDX55-205ENST00000538744 TESPA1A2RU30 521 aaPredicted RBP22.55■■□□□ 1.2
DDX55-205ENST00000538744 ARHGEF35A5YM69 484 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 NR3C2P08235 984 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 NF2P35240 595 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 KNOP1Q1ED39 458 aaKnown RBP22.55■■□□□ 1.2
DDX55-205ENST00000538744 CYP26C1Q6V0L0 522 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 RAD9BQ6WBX8 426 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 OR8K1Q8NGG5 319 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 GPRASP2Q96D09 838 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 PCMTD1Q96MG8 357 aaPredicted RBP22.55■■□□□ 1.2
DDX55-205ENST00000538744 SEL1LQ9UBV2 794 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 TCEAL9Q9UHQ7 104 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 ODF2LQ9ULJ1 636 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 MYH11P35749 1972 aa22.55■■□□□ 1.2
DDX55-205ENST00000538744 RIOK3O14730 519 aaKnown RBP22.54■■□□□ 1.2
DDX55-205ENST00000538744 NKRFO15226 690 aaKnown RBP eCLIP22.54■■□□□ 1.2
DDX55-205ENST00000538744 CCDC175P0C221 793 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 MYBP10242 640 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 TRIM21P19474 475 aaKnown RBP22.54■■□□□ 1.2
DDX55-205ENST00000538744 MTF1Q14872 753 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 FIGNQ5HY92 759 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 NLRX1Q86UT6 975 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 ZC3H15Q8WU90 426 aaKnown RBP22.54■■□□□ 1.2
DDX55-205ENST00000538744 DNAJC7Q99615 494 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 TTYH3Q9C0H2 523 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 PARVGQ9HBI0 331 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 CYP39A1Q9NYL5 469 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 TRAF3IP3Q9Y228 551 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 SAMM50Q9Y512 469 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 KIAA1217Q5T5P2 1943 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 GCNT3O95395 438 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 JAK3P52333 1124 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 MARSP56192 900 aaKnown RBP22.54■■□□□ 1.2
DDX55-205ENST00000538744 KRT76Q01546 638 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 TSR1Q2NL82 804 aaKnown RBP22.54■■□□□ 1.2
DDX55-205ENST00000538744 TREML2Q5T2D2 321 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 MYCT1Q8N699 235 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 CNKSR2Q8WXI2 1034 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 CDCA5Q96FF9 252 aa22.54■■□□□ 1.2
DDX55-205ENST00000538744 A1CFQ9NQ94 594 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms