RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RBM43Q6ZSC3 357 aaKnown RBP19.33■□□□□ 0.69
CLN6-202ENST00000538696 MIER3Q7Z3K6 550 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 SMAP1Q8IYB5 467 aaPredicted RBP19.33■□□□□ 0.69
CLN6-202ENST00000538696 IGSF22Q8N9C0 903 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 KLHDC9Q8NEP7 349 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 DISC1Q9NRI5 854 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 KCNH3Q9ULD8 1083 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 PP2D1A8MPX8 630 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 ATG7O95352 703 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 SUPT20HL2P0C7V6 817 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 CST5P28325 142 aaPredicted RBP19.32■□□□□ 0.68
CLN6-202ENST00000538696 SFNP31947 248 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 TCF7P36402 384 aaPredicted RBP19.32■□□□□ 0.68
CLN6-202ENST00000538696 CPT1AP50416 773 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 ABHD15Q6UXT9 468 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 CKAP2LQ8IYA6 745 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 RDM1Q8NG50 284 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 SEPT1Q8WYJ6 367 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 SYMPKQ92797 1274 aaKnown RBP19.32■□□□□ 0.68
CLN6-202ENST00000538696 EPSTI1Q96J88 318 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 SCN10AQ9Y5Y9 1956 aa19.32■□□□□ 0.68
CLN6-202ENST00000538696 ARID2Q68CP9 1835 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 GJB1P08034 283 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 PDIA5Q14554 519 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 LRRC41Q15345 812 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 EPHA7Q15375 998 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 MIS18BP1Q6P0N0 1132 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 PCYT2Q99447 389 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 FUCA2Q9BTY2 467 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 RAB34Q9BZG1 259 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 CRISPLD2Q9H0B8 497 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 SPC25Q9HBM1 224 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 LRWD1Q9UFC0 647 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 OGDHLQ9ULD0 1010 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 SAMM50Q9Y512 469 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 EMSYQ7Z589 1322 aa19.31■□□□□ 0.68
CLN6-202ENST00000538696 A0A087X0B3 334 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 IGKV6D-21A0A0A0MT36 114 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 LGR5O75473 907 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 LGALS2P05162 132 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 PSAPP07602 524 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 LONP1P36776 959 aaKnown RBP19.3■□□□□ 0.68
CLN6-202ENST00000538696 UTP14CQ5TAP6 766 aaKnown RBP19.3■□□□□ 0.68
CLN6-202ENST00000538696 CCSAPQ6IQ19 270 aaPredicted RBP19.3■□□□□ 0.68
CLN6-202ENST00000538696 TRIM50Q86XT4 487 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 CCDC60Q8IWA6 550 aaPredicted RBP19.3■□□□□ 0.68
CLN6-202ENST00000538696 U2AF1L4Q8WU68 220 aaKnown RBP19.3■□□□□ 0.68
CLN6-202ENST00000538696 TIGD1Q96MW7 591 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 TSPY26PQ9H489 355 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 KIAA0100Q14667 2235 aaKnown RBP19.3■□□□□ 0.68
CLN6-202ENST00000538696 LOXHD1Q8IVV2 1947 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 IGSF9BQ9UPX0 1349 aa19.3■□□□□ 0.68
CLN6-202ENST00000538696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.29■□□□□ 0.68
CLN6-202ENST00000538696 GOLGA6L3A6NEY3 463 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 SGPL1O95470 568 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 MYCNP04198 464 aaPredicted RBP19.29■□□□□ 0.68
CLN6-202ENST00000538696 ZNF286BP0CG31 522 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 CDC25AP30304 524 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 UGCGQ16739 394 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 DGKDQ16760 1214 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 BRDTQ58F21 947 aaPredicted RBP19.29■□□□□ 0.68
CLN6-202ENST00000538696 GNASQ5JWF2 1037 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 RNF180Q86T96 592 aa19.29■□□□□ 0.68
CLN6-202ENST00000538696 EIF2AK1Q9BQI3 630 aaKnown RBP19.29■□□□□ 0.68
CLN6-202ENST00000538696 MMTAG2Q9BU76 263 aaKnown RBP19.29■□□□□ 0.68
CLN6-202ENST00000538696 POLR2DO15514 142 aaKnown RBP19.28■□□□□ 0.68
CLN6-202ENST00000538696 PPFIA4O75335 1185 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 MYL3P08590 195 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 GJA8P48165 433 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 LONRF3Q496Y0 759 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 KRBA2Q6ZNG9 492 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 PDILTQ8N807 584 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 BANK1Q8NDB2 785 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 NEK9Q8TD19 979 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 AFAP1L1Q8TED9 768 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 DYDC2Q96IM9 177 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 AK8Q96MA6 479 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 C16orf70Q9BSU1 422 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 ZNF302Q9NR11 478 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 RGL1Q9NZL6 768 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 GABBR1Q9UBS5 961 aa19.28■□□□□ 0.68
CLN6-202ENST00000538696 BACH1O14867 736 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 ACTN4O43707 911 aaKnown RBP19.27■□□□□ 0.68
CLN6-202ENST00000538696 ZEB2O60315 1214 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 MED24O75448 989 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 PURAQ00577 322 aaKnown RBP19.27■□□□□ 0.68
CLN6-202ENST00000538696 CYP4A11Q02928 519 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 CTTNQ14247 550 aaKnown RBP19.27■□□□□ 0.68
CLN6-202ENST00000538696 KCNA10Q16322 511 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 HAUS3Q68CZ6 603 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 SWSAP1Q6NVH7 229 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 ARRDC4Q8NCT1 418 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 ERMNQ8TAM6 284 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 HSD17B14Q9BPX1 270 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 TMEM106CQ9BVX2 250 aa19.27■□□□□ 0.68
CLN6-202ENST00000538696 WRAP73Q9P2S5 460 aaPredicted RBP19.27■□□□□ 0.68
CLN6-202ENST00000538696 SERTAD1Q9UHV2 236 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms