RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 AP1M1Q9BXS5 423 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 COL15A1P39059 1388 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 KCNQ2O43526 872 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 PPP6R2O75170 966 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 TOM1L1O75674 476 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SLCO1A2P46721 670 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 BPIFB4P59827 614 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SEPT2Q15019 361 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 MUM1Q2TAK8 710 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 C10orf76Q5T2E6 689 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 PCDHA5Q9Y5H7 936 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ERBB3P21860 1342 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 STAT3P40763 770 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 CLNS1AP54105 237 aaKnown RBP12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SZRD1Q7Z422 152 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
LINC00346-201ENST00000538077 KLHL14Q9P2G3 628 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SETD1BQ9UPS6 1966 aaKnown RBP12.1□□□□□ -0.47
LINC00346-201ENST00000538077 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ANGPTL8Q6UXH0 198 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 CROCCP2Q86T23 111 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
LINC00346-201ENST00000538077 PPP1R13BQ96KQ4 1090 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 RMDN3Q96TC7 470 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SLC8A2Q9UPR5 921 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 K7ERI5 159 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 GSTA4O15217 222 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 SEC31AO94979 1220 aaKnown RBP12.09□□□□□ -0.47
LINC00346-201ENST00000538077 CACNB2Q08289 660 aaPredicted RBP12.09□□□□□ -0.47
LINC00346-201ENST00000538077 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
LINC00346-201ENST00000538077 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 CDHR1Q96JP9 859 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 BAG5Q9UL15 447 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 A0A0G2JLW4 131 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 STXBP2Q15833 593 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 RNF219Q5W0B1 726 aaPredicted RBP12.09□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 ASPHQ12797 758 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 FBXO18Q8NFZ0 1043 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 DYDC2Q96IM9 177 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 ANKARQ7Z5J8 1434 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 LRRD1A4D1F6 860 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 ZNF233A6NK53 670 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 PIK3R2O00459 728 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 DPYSL4O14531 572 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
LINC00346-201ENST00000538077 COG7P83436 770 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 KIF23Q02241 960 aaPredicted RBP12.09□□□□□ -0.47
LINC00346-201ENST00000538077 PSMD2Q13200 908 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 MMTAG2Q9BU76 263 aaKnown RBP12.09□□□□□ -0.47
LINC00346-201ENST00000538077 BHMT2Q9H2M3 363 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 ATP7BP35670 1465 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 POTEMA6NI47 508 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 GOLGA8KD6RF30 607 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 OPHN1O60890 802 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 PSMA2P25787 234 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 PLTPP55058 493 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 ZBTB41Q5SVQ8 909 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
LINC00346-201ENST00000538077 NPC1L1Q9UHC9 1359 aa12.08□□□□□ -0.47
LINC00346-201ENST00000538077 ADGRL3Q9HAR2 1447 aa12.08□□□□□ -0.47
LINC00346-201ENST00000538077 SLC16A4O15374 487 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 CREB3O43889 395 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 SPOPLQ6IQ16 392 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 NHEJ1Q9H9Q4 299 aaPredicted RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 MINPP1Q9UNW1 487 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 PLS3P13797 630 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 CASP1P29466 404 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 ZKSCAN8Q15776 578 aaPredicted RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 DCAF4L1Q3SXM0 396 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 CELF1Q92879 486 aaKnown RBP12.08□□□□□ -0.48
LINC00346-201ENST00000538077 RASSF4Q9H2L5 321 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 ATP6V0A4Q9HBG4 840 aa12.08□□□□□ -0.48
LINC00346-201ENST00000538077 ZNF302Q9NR11 478 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms