RNA–Protein interactions for RNA: ENST00000537784.5

CACNA2D4-206, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 2,876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-206ENST00000537784 LRRC57Q8N9N7 239 aa13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 CENPTQ96BT3 561 aa13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.311e-11■■■□□ 16.1
CACNA2D4-206ENST00000537784 DDX47Q9H0S4 455 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 CNOT10Q9H9A5 744 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 LRRC4CQ9HCJ2 640 aa13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 NOC2LQ9Y3T9 749 aaKnown RBP13.12□□□□□ -0.31
CACNA2D4-206ENST00000537784 F8VZ95 297 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 CCDC188H7C350 402 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 DAPK3O43293 454 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 KCNQ4P56696 695 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 FKBP3Q00688 224 aaKnown RBP13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 MECOMQ03112 1051 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 ARID5AQ03989 594 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 SF3B3Q15393 1217 aaKnown RBP13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 ERMARDQ5T6L9 678 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 SEC14L1Q92503 715 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 RAD54LQ92698 747 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 CHMP6Q96FZ7 201 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 XPO6Q96QU8 1125 aaKnown RBP13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 FAM129AQ9BZQ8 928 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 CCT8L1PA6NM43 557 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 TXKP42681 527 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 CLNS1AP54105 237 aaKnown RBP13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 ORC2Q13416 577 aaPredicted RBP13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 KRT71Q3SY84 523 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 C10orf76Q5T2E6 689 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 MYOCDQ8IZQ8 938 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 GANQ9H2C0 597 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 GOLPH3Q9H4A6 298 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 NOD2Q9HC29 1040 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■□ 21.8
CACNA2D4-206ENST00000537784 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 SH3BP1Q9Y3L3 701 aa13.11□□□□□ -0.31
CACNA2D4-206ENST00000537784 A0A1B0GUA9 196 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 TRIM37O94972 964 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 NAPAP54920 295 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 DDX12PQ92771 950 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 MTMR9Q96QG7 549 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 SLITRK6Q9H5Y7 841 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 TRAF5O00463 557 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 RTN2O75298 545 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 PAX7P23759 505 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.316e-7■■■□□ 14.8
CACNA2D4-206ENST00000537784 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 ENOX2Q16206 610 aaKnown RBP13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 CLEC4GQ6UXB4 293 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 RASGEF1CQ8N431 466 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 CCDC197Q8NCU1 140 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 TBCKQ8TEA7 893 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 CDK5RAP3Q96JB5 506 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 AMACRQ9UHK6 382 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 KRIT1O00522 736 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 ITGA4P13612 1032 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 MARSP56192 900 aaKnown RBP13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 TRIM59Q8IWR1 403 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 MDM1Q8TC05 714 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 CUL5Q93034 780 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 ZNF317Q96PQ6 595 aaPredicted RBP13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 SLC12A4Q9UP95 1085 aa13.1□□□□□ -0.31
CACNA2D4-206ENST00000537784 GSTA1P08263 222 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 USP17L8P0C7I0 530 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 PTK2Q05397 1052 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 TXLNGYQ9BZA5 131 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 MCM9Q9NXL9 1143 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 TTI1O43156 1089 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 PPFIA2O75334 1257 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 EIF3BP55884 814 aaKnown RBP13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 COASYQ13057 564 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 CALCRLQ16602 461 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 ZNF571Q7Z3V5 609 aaPredicted RBP13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 KCNK18Q7Z418 384 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 TPCN2Q8NHX9 752 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
CACNA2D4-206ENST00000537784 LRRC27Q9C0I9 530 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms