RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 USP26Q9BXU7 913 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 PUS7LQ9H0K6 701 aaKnown RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 BOLA2Q9H3K6 86 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 SETD4Q9NVD3 440 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 SIT1Q9Y3P8 196 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 PCDHGA2Q9Y5H1 932 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 LCTP09848 1927 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 CHD8Q9HCK8 2581 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 SPDYE4A6NLX3 237 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 CCER2I3L3R5 266 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 M0QZ92 97 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 TBC1D4O60343 1298 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 LGALS2P05162 132 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 PROS1P07225 676 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 TMC7Q7Z402 723 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 TAAR1Q96RJ0 339 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 IL1RAPL2Q9NP60 686 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 RAB23Q9ULC3 237 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 ABCB11O95342 1321 aa10.73□□□□□ -0.69
USP28-205ENST00000537706 ATRXP46100 2492 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 ANP32CO43423 234 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 LAMTOR5O43504 91 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 CHRNA1P02708 482 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 CA8P35219 290 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 SMC1AQ14683 1233 aaKnown RBP10.72□□□□□ -0.69
USP28-205ENST00000537706 TTBK2Q6IQ55 1244 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 PHLDB3Q6NSJ2 640 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 CCDC149Q6ZUS6 474 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 RASGRP2Q7LDG7 609 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 COLGALT1Q8NBJ5 622 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 FBXO4Q9UKT5 387 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 SMG5Q9UPR3 1016 aaKnown RBP10.72□□□□□ -0.69
USP28-205ENST00000537706 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 SORBS3O60504 671 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 NR3C2P08235 984 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 CFHP08603 1231 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 TGFB3P10600 412 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 EIF2AK2P19525 551 aaKnown RBP10.72□□□□□ -0.69
USP28-205ENST00000537706 PPM1AP35813 382 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 PLCB3Q01970 1234 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 HSDL1Q3SXM5 330 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 USH1GQ495M9 461 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 FBXO47Q5MNV8 452 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 RHPN1Q8TCX5 695 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 SYTL5Q8TDW5 730 aaPredicted RBP10.72□□□□□ -0.69
USP28-205ENST00000537706 KCNK12Q9HB15 430 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 EXOC6BQ9Y2D4 811 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 HCFC2Q9Y5Z7 792 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 SQORQ9Y6N5 450 aa10.72□□□□□ -0.69
USP28-205ENST00000537706 EP300Q09472 2414 aaPredicted RBP10.72□□□□□ -0.69
USP28-205ENST00000537706 NRCAMQ92823 1304 aa10.71□□□□□ -0.69
USP28-205ENST00000537706 DCNP07585 359 aaKnown RBP10.71□□□□□ -0.69
USP28-205ENST00000537706 IBSPP21815 317 aaPredicted RBP10.71□□□□□ -0.69
USP28-205ENST00000537706 APOBRQ0VD83 1088 aa10.71□□□□□ -0.69
USP28-205ENST00000537706 CA14Q9ULX7 337 aa10.71□□□□□ -0.69
USP28-205ENST00000537706 FRMPD2Q68DX3 1309 aaPredicted RBP10.71□□□□□ -0.7
USP28-205ENST00000537706 DCHS1Q96JQ0 3298 aa10.71□□□□□ -0.7
USP28-205ENST00000537706 RBAK-RBAKDNI3L0D1 243 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 HSPD1P10809 573 aaKnown RBP10.7□□□□□ -0.7
USP28-205ENST00000537706 MYCLP12524 364 aaPredicted RBP10.7□□□□□ -0.7
USP28-205ENST00000537706 TRIM27P14373 513 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 ATP5JP18859 108 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 SHC2P98077 582 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 PAK2Q13177 524 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 IER5Q5VY09 327 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
USP28-205ENST00000537706 CLUAP1Q96AJ1 413 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 KIF1BPQ96EK5 621 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 SHDQ96IW2 340 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 BCO2Q9BYV7 579 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 SPATA6Q9NWH7 488 aaPredicted RBP10.7□□□□□ -0.7
USP28-205ENST00000537706 CDH22Q9UJ99 828 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 MRPL11Q9Y3B7 192 aaKnown RBP10.7□□□□□ -0.7
USP28-205ENST00000537706 CDY2AQ9Y6F7 541 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 FOXD2O60548 495 aaPredicted RBP10.7□□□□□ -0.7
USP28-205ENST00000537706 WEE2P0C1S8 567 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 CD52P31358 61 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 SARSP49591 514 aaKnown RBP10.7□□□□□ -0.7
USP28-205ENST00000537706 MGAT3Q09327 533 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 ODR4Q5SWX8 454 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 IL31Q6EBC2 164 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 NXPE3Q969Y0 559 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 C1orf115Q9H7X2 142 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 ZSCAN32Q9NX65 697 aa10.7□□□□□ -0.7
USP28-205ENST00000537706 KRBA1A5PL33 1030 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 HIDE1A8MVS5 230 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 PATL2C9JE40 543 aaKnown RBP10.69□□□□□ -0.7
USP28-205ENST00000537706 TOP1P11387 765 aaKnown RBP10.69□□□□□ -0.7
USP28-205ENST00000537706 PMLP29590 882 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 MAGEA9P43362 315 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 GATMP50440 423 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 MRPS6P82932 125 aaKnown RBP10.69□□□□□ -0.7
USP28-205ENST00000537706 CABP7Q86V35 215 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 CRIPAKQ8N1N5 446 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 LMBR1Q8WVP7 490 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 LINC01599Q8WXQ3 324 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 GLG1Q92896 1179 aa10.69□□□□□ -0.7
USP28-205ENST00000537706 NAPBQ9H115 298 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms