RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 AGBL2Q5U5Z8 902 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 MAATS1Q7Z4T9 603 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 RPAINQ86UA6 219 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 ACTRT1Q8TDG2 376 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 DNAJC19Q96DA6 116 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 PIGSQ96S52 555 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 CCT8L2Q96SF2 557 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 EYA3Q99504 573 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 ACTR5Q9H9F9 607 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-218ENST00000537641 BIN2Q9UBW5 565 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-218ENST00000537641 POLLQ9UGP5 575 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
CPSF7-218ENST00000537641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.33□□□□□ -0.28
CPSF7-218ENST00000537641 C10orf71Q711Q0 1435 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 ESYT3A0FGR9 886 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 CCDC188H7C350 402 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 SLC37A4O43826 429 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 GSCP56915 257 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-218ENST00000537641 GUCY1A3Q02108 690 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 KIAA0753Q2KHM9 967 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 MFSD14BQ5SR56 506 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 CEP85LQ5SZL2 805 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 RUFY4Q6ZNE9 571 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 CCDC65Q8IXS2 484 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 NAP1L4Q99733 375 aaKnown RBP13.32□□□□□ -0.28
CPSF7-218ENST00000537641 TACO1Q9BSH4 297 aaKnown RBP13.32□□□□□ -0.28
CPSF7-218ENST00000537641 NT5C3AQ9H0P0 336 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-218ENST00000537641 TMEM260Q9NX78 707 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
CPSF7-218ENST00000537641 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
CPSF7-218ENST00000537641 A0A087X0T9 212 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 POTEMA6NI47 508 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 GCOM1H8Y6P7 765 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-218ENST00000537641 TDP2O95551 362 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 FAM228BP0C875 321 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 MYZAPP0CAP1 466 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 HSPA1LP34931 641 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 CDK8P49336 464 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 RHBDL3P58872 404 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 ACTN3Q08043 901 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-218ENST00000537641 LRRC41Q15345 812 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 C6orf89Q6UWU4 347 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 PANK4Q9NVE7 773 aa13.31□□□□□ -0.28
CPSF7-218ENST00000537641 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
CPSF7-218ENST00000537641 PAEPP09466 180 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
CPSF7-218ENST00000537641 ECHS1P30084 290 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 HSD17B3P37058 310 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
CPSF7-218ENST00000537641 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 USP17L2Q6R6M4 530 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 ARMC9Q7Z3E5 817 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 SP8Q8IXZ3 490 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.3□□□□□ -0.28
CPSF7-218ENST00000537641 CPVLQ9H3G5 476 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
CPSF7-218ENST00000537641 H0YGN5 161 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 PGRMC1O00264 195 aaKnown RBP13.3□□□□□ -0.28
CPSF7-218ENST00000537641 EDIL3O43854 480 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 EPS15P42566 896 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 SMTNP53814 917 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
CPSF7-218ENST00000537641 SPDYCQ5MJ68 293 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 GPIHBP1Q8IV16 184 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 KLHL7Q8IXQ5 586 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 GLIS3Q8NEA6 775 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 CYFIP2Q96F07 1278 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 NUDT12Q9BQG2 462 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 SLITRK6Q9H5Y7 841 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 SLC12A6Q9UHW9 1150 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 SUGT1Q9Y2Z0 365 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 NFS1Q9Y697 457 aa13.3□□□□□ -0.28
CPSF7-218ENST00000537641 A0A0A6YYK5 440 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-218ENST00000537641 C5orf60A6NFR6 353 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 E7EVH7 732 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 MYO1FO00160 1098 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 KCNK3O14649 394 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 CHUKO15111 745 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 PRKCIP41743 596 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 TAX1BP1Q86VP1 789 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 FAM133AQ8N9E0 248 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 P3H4Q92791 437 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 PACSIN1Q9BY11 444 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 COA1Q9GZY4 146 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 KCTD10Q9H3F6 313 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 INTUQ9ULD6 942 aa13.29□□□□□ -0.28
CPSF7-218ENST00000537641 NENFQ9UMX5 172 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms