RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
CHD4-207ENST00000537634 NAP1L2Q9ULW6 460 aaPredicted RBP11.07□□□□□ -0.64
CHD4-207ENST00000537634 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
CHD4-207ENST00000537634 KLF18A0A0U1RQI7 1052 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 MBLAC1A4D2B0 266 aaPredicted RBP11.06□□□□□ -0.64
CHD4-207ENST00000537634 RRN3P2A6NIE6 340 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 STXBP3O00186 592 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 HMGB1P09429 215 aaKnown RBP11.06□□□□□ -0.64
CHD4-207ENST00000537634 EXOSC10Q01780 885 aaKnown RBP11.06□□□□□ -0.64
CHD4-207ENST00000537634 FUT2Q10981 343 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 ADCK5Q3MIX3 580 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 TSGA10IPQ3SY00 556 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 EPC2Q52LR7 807 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 CEP55Q53EZ4 464 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 DNAJB3Q8WWF6 145 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
CHD4-207ENST00000537634 MRPL38Q96DV4 380 aaKnown RBP11.06□□□□□ -0.64
CHD4-207ENST00000537634 PGBD1Q96JS3 809 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 ANO3Q9BYT9 981 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 FAM49AQ9H0Q0 323 aaPredicted RBP11.06□□□□□ -0.64
CHD4-207ENST00000537634 GLT8D2Q9H1C3 349 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 CDY2AQ9Y6F7 541 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 V9GY48 417 aaPredicted RBP11.06□□□□□ -0.64
CHD4-207ENST00000537634 NFASCO94856 1347 aa11.06□□□□□ -0.64
CHD4-207ENST00000537634 SMCO2A6NFE2 343 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 M0QZ92 97 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 INSRRP14616 1297 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 ZNF76P36508 570 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 SREBF1P36956 1147 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 RCAN1P53805 252 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 ACTR2P61160 394 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 MRPS6P82932 125 aaKnown RBP11.05□□□□□ -0.64
CHD4-207ENST00000537634 MGAT3Q09327 533 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 AP3B2Q13367 1082 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 GPM6BQ13491 265 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 LPIN1Q14693 890 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 TIGD5Q53EQ6 642 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 MARCH8Q5T0T0 291 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 TSHZ1Q6ZSZ6 1077 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 TMEM192Q8IY95 271 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 CYP2W1Q8TAV3 490 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 IL17RAQ96F46 866 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 PCYT2Q99447 389 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 UBE2ZQ9H832 354 aaPredicted RBP11.05□□□□□ -0.64
CHD4-207ENST00000537634 BRWD1Q9NSI6 2320 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 BARHL2Q9NY43 387 aa11.05□□□□□ -0.64
CHD4-207ENST00000537634 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 H3BNC9 293 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 ARP10275 920 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 COL9A1P20849 921 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 CDC27P30260 824 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 CTNNB1P35222 781 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 METAP2P50579 478 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHD4-207ENST00000537634 STAT5BP51692 787 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 FBXO47Q5MNV8 452 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 IER5Q5VY09 327 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 C1QTNF1Q9BXJ1 281 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 AGO4Q9HCK5 861 aaKnown RBP11.04□□□□□ -0.64
CHD4-207ENST00000537634 TMEM260Q9NX78 707 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 ADGRA3Q8IWK6 1321 aa11.04□□□□□ -0.64
CHD4-207ENST00000537634 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 DDX39AO00148 427 aaKnown RBP11.03□□□□□ -0.64
CHD4-207ENST00000537634 MEIS1O00470 390 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 BACH1O14867 736 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 KCNA5P22460 613 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 CD52P31358 61 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 CLK2P49760 499 aaKnown RBP11.03□□□□□ -0.64
CHD4-207ENST00000537634 SLC26A2P50443 739 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 ITGB3BPQ13352 177 aaPredicted RBP11.03□□□□□ -0.64
CHD4-207ENST00000537634 PLCB4Q15147 1175 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 PFKFB3Q16875 520 aaPredicted RBP11.03□□□□□ -0.64
CHD4-207ENST00000537634 FAM160B1Q5W0V3 765 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 NIPA1Q7RTP0 329 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 PLPPR4Q7Z2D5 763 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 CCDC12Q8WUD4 166 aaPredicted RBP11.03□□□□□ -0.64
CHD4-207ENST00000537634 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 ZBTB10Q96DT7 871 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
CHD4-207ENST00000537634 RWDD3Q9Y3V2 267 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 TRPV2Q9Y5S1 764 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
CHD4-207ENST00000537634 TTC3P53804 2025 aa11.02□□□□□ -0.64
CHD4-207ENST00000537634 REV3LO60673 3130 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
CHD4-207ENST00000537634 ENPP3O14638 875 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 SCG2P13521 617 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 CPA1P15085 419 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 TMEM62Q0P6H9 643 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 PAK2Q13177 524 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 BTG3Q14201 252 aaPredicted RBP11.02□□□□□ -0.65
CHD4-207ENST00000537634 LEXMQ3ZCV2 418 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 JAKMIP3Q5VZ66 844 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 MCTP2Q6DN12 878 aa11.02□□□□□ -0.65
CHD4-207ENST00000537634 BLOC1S2Q6QNY1 142 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms