RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 COL4A3BPQ9Y5P4 624 aa19.31■□□□□ 0.68
SNX17-210ENST00000537606 MYCLP12524 364 aaPredicted RBP19.31■□□□□ 0.68
SNX17-210ENST00000537606 SETQ01105 290 aaPredicted RBP19.31■□□□□ 0.68
SNX17-210ENST00000537606 TRMT1LQ7Z2T5 733 aaKnown RBP19.31■□□□□ 0.68
SNX17-210ENST00000537606 TEX2Q8IWB9 1127 aa19.31■□□□□ 0.68
SNX17-210ENST00000537606 SMCR8Q8TEV9 937 aaPredicted RBP19.31■□□□□ 0.68
SNX17-210ENST00000537606 UPF1Q92900 1129 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNX17-210ENST00000537606 DNAJC7Q99615 494 aa19.31■□□□□ 0.68
SNX17-210ENST00000537606 EPC1Q9H2F5 836 aa19.31■□□□□ 0.68
SNX17-210ENST00000537606 TUFT1Q9NNX1 390 aa19.31■□□□□ 0.68
SNX17-210ENST00000537606 GINM1Q9NU53 330 aa19.31■□□□□ 0.68
SNX17-210ENST00000537606 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
SNX17-210ENST00000537606 HOXD13P35453 343 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 KCNA1Q09470 495 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 ADAM9Q13443 819 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 TSR1Q2NL82 804 aaKnown RBP19.3■□□□□ 0.68
SNX17-210ENST00000537606 MNS1Q8NEH6 495 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 IKZF4Q9H2S9 585 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 TFR2Q9UP52 801 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 RPTORQ8N122 1335 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 TBCAO75347 108 aaKnown RBP19.3■□□□□ 0.68
SNX17-210ENST00000537606 MAP3K9P80192 1104 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 ZNF569Q5MCW4 686 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 KLRG1Q96E93 195 aa19.3■□□□□ 0.68
SNX17-210ENST00000537606 LMNB1P20700 586 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 TKFCQ3LXA3 575 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 ARHGAP29Q52LW3 1261 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 GPC2Q8N158 579 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 LXNQ9BS40 222 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 NUP58Q9BVL2 599 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 AS3MTQ9HBK9 375 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 TRIM10Q9UDY6 481 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 SIK3Q9Y2K2 1263 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 REXO2Q9Y3B8 237 aaKnown RBP19.29■□□□□ 0.68
SNX17-210ENST00000537606 EPN1Q9Y6I3 576 aaPredicted RBP19.29■□□□□ 0.68
SNX17-210ENST00000537606 POLR2AP24928 1970 aaKnown RBP19.29■□□□□ 0.68
SNX17-210ENST00000537606 GCNT3O95395 438 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 ITGB3BPQ13352 177 aaPredicted RBP19.29■□□□□ 0.68
SNX17-210ENST00000537606 RNF207Q6ZRF8 634 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 ZNF397Q8NF99 534 aaPredicted RBP19.29■□□□□ 0.68
SNX17-210ENST00000537606 RMDN3Q96TC7 470 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 MRFAP1Q9Y605 127 aa19.29■□□□□ 0.68
SNX17-210ENST00000537606 TADA3O75528 432 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 TFRCP02786 760 aaKnown RBP19.28■□□□□ 0.68
SNX17-210ENST00000537606 EPHA7Q15375 998 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 B3GNT9Q6UX72 402 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 C1orf186Q6ZWK4 172 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 KSR1Q8IVT5 923 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 MYCT1Q8N699 235 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 SH2D3AQ9BRG2 576 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 SAMM50Q9Y512 469 aa19.28■□□□□ 0.68
SNX17-210ENST00000537606 KIF5CO60282 957 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 NDUFA10O95299 355 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 NR2F2P24468 414 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 NMT1P30419 496 aaKnown RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 ARHGAP25P42331 645 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 ZBED6P86452 979 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 BAATQ14032 418 aaPredicted RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 PGM5Q15124 567 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 MAEAQ7L5Y9 396 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 MIER3Q7Z3K6 550 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 KRT26Q7Z3Y9 468 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 CRACR2AQ9BSW2 395 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 RNF146Q9NTX7 359 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 DHX15O43143 795 aaKnown RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 FAM13AO94988 1023 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 KIF20AO95235 890 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 HOXA7P31268 230 aaPredicted RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 MTMR1Q13613 665 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 KNOP1Q1ED39 458 aaKnown RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 ZC2HC1CQ53FD0 456 aaPredicted RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 PCNX4Q63HM2 1172 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 EPM2AIP1Q7L775 607 aaPredicted RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 SLC35F6Q8N357 371 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 RETREG2Q8NC44 543 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 UBXN4Q92575 508 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 NACC1Q96RE7 527 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 AGO4Q9HCK5 861 aaKnown RBP19.27■□□□□ 0.68
SNX17-210ENST00000537606 UBIAD1Q9Y5Z9 338 aa19.27■□□□□ 0.68
SNX17-210ENST00000537606 ATP9AO75110 1047 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 APBA1Q02410 837 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 PPP2R3AQ06190 1150 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 RIT2Q99578 217 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 FHDC1Q9C0D6 1143 aaPredicted RBP19.26■□□□□ 0.67
SNX17-210ENST00000537606 DOCK1Q14185 1865 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 CLIC2O15247 247 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 KCNMA1Q12791 1236 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 ARHGEF16Q5VV41 709 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 CEP63Q96MT8 703 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 JADE2Q9NQC1 790 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 SSC5DA1L4H1 1573 aa19.26■□□□□ 0.67
SNX17-210ENST00000537606 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
SNX17-210ENST00000537606 PEX10O60683 326 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 PLEKP08567 350 aaPredicted RBP19.25■□□□□ 0.67
SNX17-210ENST00000537606 FOXR2Q6PJQ5 311 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 PDCD2LQ9BRP1 358 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 PXMP2Q9NR77 195 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 ZNHIT6Q9NWK9 470 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms