RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SLITRK3O94933 977 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 FAM13AO94988 1023 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 MYBP10242 640 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 EPS15P42566 896 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 KCNMA1Q12791 1236 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 RINT1Q6NUQ1 792 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 AGBL1Q96MI9 1066 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 MXRA8Q9BRK3 442 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 LSM14BQ9BX40 385 aaKnown RBP17.27■□□□□ 0.36
MKS1-204ENST00000537529 DEF6Q9H4E7 631 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 OLFML3Q9NRN5 406 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 ARHGAP20Q9P2F6 1191 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 ATAD5Q96QE3 1844 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 NFKBIEO00221 500 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 CTNND1O60716 968 aaKnown RBP17.27■□□□□ 0.35
MKS1-204ENST00000537529 CBX1P83916 185 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 KIF5AQ12840 1032 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 EPHA7Q15375 998 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 FRMD5Q7Z6J6 570 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 RIT2Q99578 217 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 UNC45AQ9H3U1 944 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 TYW1Q9NV66 732 aaKnown RBP17.27■□□□□ 0.35
MKS1-204ENST00000537529 MYO6Q9UM54 1294 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 ZNF536O15090 1300 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 RPTORQ8N122 1335 aa17.27■□□□□ 0.35
MKS1-204ENST00000537529 RSPH10B2B2RC85 870 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 USO1O60763 962 aaKnown RBP17.26■□□□□ 0.35
MKS1-204ENST00000537529 GCNT3O95395 438 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 RSPH10BP0C881 870 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 ARP10275 920 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 EIF4A3P38919 411 aaKnown RBP17.26■□□□□ 0.35
MKS1-204ENST00000537529 KIF11P52732 1056 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 AMPD2Q01433 879 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 TMCO3Q6UWJ1 677 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 CCDC155Q8N6L0 562 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 NEK9Q8TD19 979 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 PIGOQ8TEQ8 1089 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 SYN2Q92777 582 aaPredicted RBP17.26■□□□□ 0.35
MKS1-204ENST00000537529 NACC1Q96RE7 527 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
MKS1-204ENST00000537529 FRMPD4Q14CM0 1322 aa17.26■□□□□ 0.35
MKS1-204ENST00000537529 POTEB2H3BUK9 544 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 IPO5O00410 1097 aaKnown RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
MKS1-204ENST00000537529 PRPF6O94906 941 aaKnown RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 LCA5LO95447 670 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 PLEKP08567 350 aaPredicted RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 BCRP11274 1271 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 RPL13P26373 211 aaKnown RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 C1orf186Q6ZWK4 172 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 NIPA1Q7RTP0 329 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 TXLNBQ8N3L3 684 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 PURBQ96QR8 312 aaKnown RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 KCND2Q9NZV8 630 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 ARMCX3Q9UH62 379 aaPredicted RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 PNMA2Q9UL42 364 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 SLC16A3O15427 465 aaKnown RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 AKR1B10O60218 316 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 HOXD13P35453 343 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 GHRHRQ02643 423 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 SLC30A10Q6XR72 485 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 CLEC4DQ8WXI8 215 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 IFIH1Q9BYX4 1025 aaKnown RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 LACRTQ9GZZ8 138 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 ZNF446Q9NWS9 450 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 SEL1LQ9UBV2 794 aa17.25■□□□□ 0.35
MKS1-204ENST00000537529 SCAF8Q9UPN6 1271 aaKnown RBP17.25■□□□□ 0.35
MKS1-204ENST00000537529 SSU72P8A0A1W2PR75 194 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 RCCD1A6NED2 376 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 GMPSP49915 693 aaPredicted RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 BMS1Q14692 1282 aaKnown RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 SFMBT2Q5VUG0 894 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 MICALL2Q8IY33 904 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 SAMD3Q8N6K7 520 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 METTL14Q9HCE5 456 aaKnown RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 TFR2Q9UP52 801 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 PCDHA13Q9Y5I0 950 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 ASTN1O14525 1302 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 UBE4BO95155 1302 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 RBBP6Q7Z6E9 1792 aaKnown RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 CTAGE15A4D2H0 777 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 SMCHD1A6NHR9 2005 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 NFIBO00712 420 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 ZNF263O14978 683 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 NOL4O94818 638 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 EGFRP00533 1210 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 NR3C1P04150 777 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 CTAGE8P0CG41 777 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 EPB41P11171 864 aaKnown RBP17.24■□□□□ 0.35
MKS1-204ENST00000537529 KCNH2Q12809 1159 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 STXBP4Q6ZWJ1 553 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 CTAGE6Q86UF2 777 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 CTAGE4Q8IX94 777 aa17.24■□□□□ 0.35
MKS1-204ENST00000537529 MYCT1Q8N699 235 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms