RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PPP1R9AQ9ULJ8 1098 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 DAAM1Q9Y4D1 1078 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 ZNF536O15090 1300 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 RASSF10A6NK89 507 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 GMPSP49915 693 aaPredicted RBP14.97□□□□□ -0.01
SMG6-203ENST00000536871 OAZ1P54368 228 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 KIF5AQ12840 1032 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 ELF2Q15723 593 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 SFR1Q86XK3 245 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 CYP2W1Q8TAV3 490 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 RABGGTAQ92696 567 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 GOLGA1Q92805 767 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 TIPINQ9BVW5 301 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 CARD6Q9BX69 1037 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 PARVGQ9HBI0 331 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 CNOT7Q9UIV1 285 aaKnown RBP14.97□□□□□ -0.01
SMG6-203ENST00000536871 ZNF112Q9UJU3 913 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 MYO6Q9UM54 1294 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 C19orf81C9J6K1 198 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 EML1O00423 815 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 LCA5LO95447 670 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 NR2F2P24468 414 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 GUCY2CP25092 1073 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 INPP5BP32019 993 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 VAV2P52735 878 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 PSMC6P62333 389 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 SRGAP1Q7Z6B7 1085 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 TPH2Q8IWU9 490 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 CDAN1Q8IWY9 1227 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 FBXO28Q9NVF7 368 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 ARMCX3Q9UH62 379 aaPredicted RBP14.96□□□□□ -0.01
SMG6-203ENST00000536871 TCEAL9Q9UHQ7 104 aa14.96□□□□□ -0.01
SMG6-203ENST00000536871 SHTN1A0MZ66 631 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 ANO9A1A5B4 782 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 P4HBP07237 508 aaKnown RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 MAPTP10636 758 aaKnown RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 EPB41P11171 864 aaKnown RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 ZNF131P52739 623 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 CYP4A11Q02928 519 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 MYBPC2Q14324 1141 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 CCDC122Q5T0U0 273 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 C1orf186Q6ZWK4 172 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 FMNL3Q8IVF7 1028 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 NELFCDQ8IXH7 590 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 SLC17A8Q8NDX2 589 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 CLEC4DQ8WXI8 215 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 TBC1D5Q92609 795 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 DYDC2Q96IM9 177 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 C12orf42Q96LP6 360 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 MKNK1Q9BUB5 465 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 GLIS2Q9BZE0 524 aaPredicted RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 DEF6Q9H4E7 631 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 JADE2Q9NQC1 790 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 PICK1Q9NRD5 415 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 TBC1D7Q9P0N9 293 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 HACL1Q9UJ83 578 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 BCS1LQ9Y276 419 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 PCDHB13Q9Y5F0 798 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 UBIAD1Q9Y5Z9 338 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 BRCA1P38398 1863 aaKnown RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 NPHP3-ACAD11A0A0J9YXS1 232 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 FANCGO15287 622 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 MAFGO15525 162 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 FLOT1O75955 427 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 LYPLA2O95372 231 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 H2AFXP16104 143 aaPredicted RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 ANXA13P27216 316 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 BACE1P56817 501 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 ERCC6LQ2NKX8 1250 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 SLC9C1Q4G0N8 1177 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 PDXDC1Q6P996 788 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 SLC35F6Q8N357 371 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 GLIS3Q8NEA6 775 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 RDM1Q8NG50 284 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 JAKMIP2Q96AA8 810 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 EEF2KMTQ96G04 330 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 RPGRIP1Q96KN7 1286 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 AGBL1Q96MI9 1066 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 ZSWIM4Q9H7M6 989 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 PLCB1Q9NQ66 1216 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 FAM207AQ9NSI2 230 aaPredicted RBP14.95□□□□□ -0.02
SMG6-203ENST00000536871 RGL1Q9NZL6 768 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 FBXL5Q9UKA1 691 aa14.95□□□□□ -0.02
SMG6-203ENST00000536871 GTPBP10A4D1E9 387 aaKnown RBP14.94□□□□□ -0.02
SMG6-203ENST00000536871 ATP8B1O43520 1251 aa14.94□□□□□ -0.02
SMG6-203ENST00000536871 GCNT3O95395 438 aa14.94□□□□□ -0.02
SMG6-203ENST00000536871 VCAM1P19320 739 aa14.94□□□□□ -0.02
SMG6-203ENST00000536871 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
SMG6-203ENST00000536871 RUSC1Q9BVN2 902 aa14.94□□□□□ -0.02
SMG6-203ENST00000536871 UNC45AQ9H3U1 944 aa14.94□□□□□ -0.02
SMG6-203ENST00000536871 DBR1Q9UK59 544 aaKnown RBP14.94□□□□□ -0.02
SMG6-203ENST00000536871 REXO2Q9Y3B8 237 aaKnown RBP14.94□□□□□ -0.02
SMG6-203ENST00000536871 BZW2Q9Y6E2 419 aaKnown RBP14.94□□□□□ -0.02
SMG6-203ENST00000536871 ARHGEF35A5YM69 484 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 AFPP02771 609 aaKnown RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 SERPING1P05155 500 aa14.93□□□□□ -0.02
SMG6-203ENST00000536871 XRCC5P13010 732 aaKnown RBP14.93□□□□□ -0.02
SMG6-203ENST00000536871 SFNP31947 248 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms