RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 NENFQ9UMX5 172 aa13.24□□□□□ -0.29
PTCD2-211ENST00000536805 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
PTCD2-211ENST00000536805 SART1O43290 800 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 CEP104O60308 925 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 RNASE9P60153 205 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 PTK2Q05397 1052 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 ECM1Q16610 540 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 IRF2BP2Q7Z5L9 587 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 SLFN11Q7Z7L1 901 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 TXNRD3Q86VQ6 643 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 CCDC50Q8IVM0 306 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 LMBR1Q8WVP7 490 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 NAP1L4Q99733 375 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 CXorf56Q9H5V9 222 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 SLC40A1Q9NP59 571 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 PPANQ9NQ55 473 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 DDX20Q9UHI6 824 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 FRMD3A2A2Y4 597 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 CETN3O15182 167 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 RDXP35241 583 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 NPEPPSP55786 919 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 ARID5AQ03989 594 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 KCNH2Q12809 1159 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 PREPLQ4J6C6 727 aaPredicted RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 LACTB2Q53H82 288 aaPredicted RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 DPY19L2P1Q6NXN4 242 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 ZNF571Q7Z3V5 609 aaPredicted RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 MAPKAPK5Q8IW41 473 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 TPCN2Q8NHX9 752 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 SCFD1Q8WVM8 642 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 VAT1LQ9HCJ6 419 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 FAM114A2Q9NRY5 505 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
PTCD2-211ENST00000536805 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 FBXL5Q9UKA1 691 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 JAG2Q9Y219 1238 aa13.23□□□□□ -0.29
PTCD2-211ENST00000536805 LOC102724159A0A0B4J2E5 919 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 A0A0G2JS52 829 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 USP17L5A8MUK1 530 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 FLOT1O75955 427 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 CDR1P51861 262 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 PWP2Q15269 919 aaKnown RBP13.22□□□□□ -0.29
PTCD2-211ENST00000536805 ANKRD20A8PQ5CZ79 823 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 MAGEC3Q8TD91 643 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 HAS1Q92839 578 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 NEUROG2Q9H2A3 272 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 CENPHQ9H3R5 247 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 CNOT10Q9H9A5 744 aaKnown RBP13.22□□□□□ -0.29
PTCD2-211ENST00000536805 DDX25Q9UHL0 483 aaKnown RBP13.22□□□□□ -0.29
PTCD2-211ENST00000536805 STXBP5LQ9Y2K9 1186 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 PITPNM2Q9BZ72 1349 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
PTCD2-211ENST00000536805 TMCO5BA8MYB1 307 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 KRIT1O00522 736 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 C21orf2O43822 256 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 GHRP10912 638 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 PDHBP11177 359 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
PTCD2-211ENST00000536805 EIF3BP55884 814 aaKnown RBP13.21□□□□□ -0.29
PTCD2-211ENST00000536805 ADAM9Q13443 819 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 DIXDC1Q155Q3 683 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 ALKBH5Q6P6C2 394 aaKnown RBP13.21□□□□□ -0.29
PTCD2-211ENST00000536805 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 OR2W6PQ8NHA6 318 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 UBLCP1Q8WVY7 318 aaPredicted RBP13.21□□□□□ -0.29
PTCD2-211ENST00000536805 TATDN2Q93075 761 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 SEC16BQ96JE7 1060 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 CCDC114Q96M63 670 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 SPAG5Q96R06 1193 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 JPH2Q9BR39 696 aaPredicted RBP13.21□□□□□ -0.29
PTCD2-211ENST00000536805 FGFBP2Q9BYJ0 223 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 SWAP70Q9UH65 585 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.29
PTCD2-211ENST00000536805 TTC7AQ9ULT0 858 aaPredicted RBP13.21□□□□□ -0.29
PTCD2-211ENST00000536805 GFPT2O94808 682 aa13.21□□□□□ -0.3
PTCD2-211ENST00000536805 AFPP02771 609 aaKnown RBP13.21□□□□□ -0.3
PTCD2-211ENST00000536805 PLA2G4BP0C869 781 aa13.21□□□□□ -0.3
PTCD2-211ENST00000536805 UCHL3P15374 230 aa13.21□□□□□ -0.3
PTCD2-211ENST00000536805 PLCG2P16885 1265 aa13.21□□□□□ -0.3
PTCD2-211ENST00000536805 TNNI2P48788 182 aa13.21□□□□□ -0.3
PTCD2-211ENST00000536805 NEDD9Q14511 834 aa13.21□□□□□ -0.3
PTCD2-211ENST00000536805 DDB1Q16531 1140 aa13.21□□□□□ -0.3
PTCD2-211ENST00000536805 WLSQ5T9L3 541 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms