RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 CCDC60Q8IWA6 550 aaPredicted RBP23.69■■□□□ 1.38
LPCAT3-204ENST00000536797 AFAP1L1Q8TED9 768 aa23.69■■□□□ 1.38
LPCAT3-204ENST00000536797 TNPO1Q92973 898 aaKnown RBP23.69■■□□□ 1.38
LPCAT3-204ENST00000536797 UNC45AQ9H3U1 944 aa23.69■■□□□ 1.38
LPCAT3-204ENST00000536797 DISC1Q9NRI5 854 aa23.69■■□□□ 1.38
LPCAT3-204ENST00000536797 NOL7Q9UMY1 257 aaKnown RBP23.69■■□□□ 1.38
LPCAT3-204ENST00000536797 NEMFO60524 1076 aa23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 HOXC8P31273 242 aa23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 SWSAP1Q6NVH7 229 aa23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 SLFN12Q8IYM2 578 aa23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 NOC4LQ9BVI4 516 aaKnown RBP23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 TRIP12Q14669 1992 aaPredicted RBP23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 NRCAMQ92823 1304 aa23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 MYH9P35579 1960 aaKnown RBP23.68■■□□□ 1.38
LPCAT3-204ENST00000536797 WNT7AO00755 349 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 PDCP20941 246 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 TRAPPC10P48553 1259 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 ZNF200P98182 395 aaPredicted RBP23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 CALCRLQ16602 461 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 MFSD5Q6N075 450 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 PDXDC2PQ6P474 469 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 MIER3Q7Z3K6 550 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 CCDC155Q8N6L0 562 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 RDM1Q8NG50 284 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 HAS1Q92839 578 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 ATP6V0A1Q93050 837 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 SETD4Q9NVD3 440 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 TRPC6Q9Y210 931 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 CYP2C18P33260 490 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 PPFIA1Q13136 1202 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 PTK7Q13308 1070 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 BFSP2Q13515 415 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 HIC1Q14526 733 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 PLCB4Q15147 1175 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 B3GNT9Q6UX72 402 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 TMEM199Q8N511 208 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 CAGE1Q8TC20 777 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 CTAGE1Q96RT6 745 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 FOXD4L1Q9NU39 408 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 GABBR1Q9UBS5 961 aa23.67■■□□□ 1.38
LPCAT3-204ENST00000536797 WDR81Q562E7 1941 aa23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 MCM7P33993 719 aa23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 BMP8BP34820 402 aa23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 FPGSQ05932 587 aa23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 ORC2Q13416 577 aaPredicted RBP23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 TTC38Q5R3I4 469 aa23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 LMBR1Q8WVP7 490 aa23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 UBE2OQ9C0C9 1292 aaKnown RBP23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 COLQQ9Y215 455 aaPredicted RBP23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 MAFBQ9Y5Q3 323 aaPredicted RBP23.66■■□□□ 1.38
LPCAT3-204ENST00000536797 UMODL1Q5DID0 1318 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 IGSF9BQ9UPX0 1349 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 POTEB3A0JP26 581 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 PITPNM1O00562 1244 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 TREHO43280 583 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 PPP2R5CQ13362 524 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 GRIK4Q16099 956 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 POTEBQ6S5H4 581 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 CKAP2LQ8IYA6 745 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 RETREG2Q8NC44 543 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 VAV3Q9UKW4 847 aa23.65■■□□□ 1.38
LPCAT3-204ENST00000536797 RRN3P2A6NIE6 340 aa23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 HSP90AA1P07900 732 aaKnown RBP23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 INSRRP14616 1297 aa23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 CCL23P55773 120 aa23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 ZNF174Q15697 407 aa23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 SERINC5Q86VE9 423 aa23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 ATP8B4Q8TF62 1192 aa23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 DHX38Q92620 1227 aaKnown RBP23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 PRO3102Q9H379 93 aa23.64■■□□□ 1.37
LPCAT3-204ENST00000536797 TANC1Q9C0D5 1861 aa23.63■■□□□ 1.37
LPCAT3-204ENST00000536797 HBP1O60381 514 aa23.63■■□□□ 1.37
LPCAT3-204ENST00000536797 IGBP1P78318 339 aa23.63■■□□□ 1.37
LPCAT3-204ENST00000536797 ADAM17P78536 824 aa23.63■■□□□ 1.37
LPCAT3-204ENST00000536797 PPIGQ13427 754 aaKnown RBP eCLIP23.63■■□□□ 1.37
LPCAT3-204ENST00000536797 WNT8AQ9H1J5 351 aa23.63■■□□□ 1.37
LPCAT3-204ENST00000536797 PCDHA12Q9UN75 941 aa23.63■■□□□ 1.37
LPCAT3-204ENST00000536797 VPS37CA5D8V6 355 aaPredicted RBP23.62■■□□□ 1.37
LPCAT3-204ENST00000536797 RBL2Q08999 1139 aa23.62■■□□□ 1.37
LPCAT3-204ENST00000536797 BBXQ8WY36 941 aaPredicted RBP23.62■■□□□ 1.37
LPCAT3-204ENST00000536797 FAM167AQ96KS9 214 aa23.62■■□□□ 1.37
LPCAT3-204ENST00000536797 MTMR9Q96QG7 549 aa23.62■■□□□ 1.37
LPCAT3-204ENST00000536797 TUBE1Q9UJT0 475 aa23.62■■□□□ 1.37
LPCAT3-204ENST00000536797 CSF2RAP15509 400 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 ATP4AP20648 1035 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 TXKP42681 527 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 NBR1Q14596 966 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 RILPL1Q5EBL4 403 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 NCAPH2Q6IBW4 605 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 SCLYQ96I15 445 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 TMEM60Q9H2L4 133 aa23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 TTC12Q9H892 705 aaPredicted RBP23.61■■□□□ 1.37
LPCAT3-204ENST00000536797 EML1O00423 815 aa23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 CKBP12277 381 aa23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 SYT1P21579 422 aa23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 TOB1P50616 345 aaPredicted RBP23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 SPIRE1Q08AE8 756 aa23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 UGCGQ16739 394 aa23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 TRMT1LQ7Z2T5 733 aaKnown RBP23.6■■□□□ 1.37
LPCAT3-204ENST00000536797 WNT8BQ93098 351 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms