RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PTPN11Q06124 597 aaPredicted RBP20.4■□□□□ 0.86
CCDC61-201ENST00000536603 KRT25Q7Z3Z0 450 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 CCDC155Q8N6L0 562 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 ARNTL2Q8WYA1 636 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 TTC28Q96AY4 2481 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 UIMC1Q96RL1 719 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 C16orf70Q9BSU1 422 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 KATNAL1Q9BW62 490 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 TANC1Q9C0D5 1861 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 MTCH2Q9Y6C9 303 aa20.4■□□□□ 0.86
CCDC61-201ENST00000536603 F2P00734 622 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 LGALS2P05162 132 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 KCNJ6P48051 423 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 KCNQ1P51787 676 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 ITGB3BPQ13352 177 aaPredicted RBP20.39■□□□□ 0.85
CCDC61-201ENST00000536603 TRIM29Q14134 588 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 MFSD10Q14728 455 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 NONOQ15233 471 aaKnown RBP eCLIP20.39■□□□□ 0.85
CCDC61-201ENST00000536603 KIAA0753Q2KHM9 967 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 PRR16Q569H4 304 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 UTP14CQ5TAP6 766 aaKnown RBP20.39■□□□□ 0.85
CCDC61-201ENST00000536603 PHOSPHO2Q8TCD6 241 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 SEPT1Q8WYJ6 367 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 SDF4Q9BRK5 362 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 JPH1Q9HDC5 661 aaPredicted RBP20.39■□□□□ 0.85
CCDC61-201ENST00000536603 SLC9A2Q9UBY0 812 aa20.39■□□□□ 0.85
CCDC61-201ENST00000536603 NFASCO94856 1347 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 CCDC194A0A1B0GVG4 234 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 HAS3O00219 553 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 BMP1P13497 986 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 KRT2P35908 639 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 MCM2P49736 904 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 HMGN5P82970 282 aaKnown RBP20.38■□□□□ 0.85
CCDC61-201ENST00000536603 PTGISQ16647 500 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 INF2Q27J81 1249 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 KRT40Q6A162 431 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 HERC6Q8IVU3 1022 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 C7orf31Q8N865 590 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 TMX3Q96JJ7 454 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 BRMS1Q9HCU9 246 aa20.38■□□□□ 0.85
CCDC61-201ENST00000536603 GSTTP1A0A1W2PQM5 241 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 H3BRB1 525 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 IPO5O00410 1097 aaKnown RBP20.37■□□□□ 0.85
CCDC61-201ENST00000536603 TLL1O43897 1013 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 TCF7P36402 384 aaPredicted RBP20.37■□□□□ 0.85
CCDC61-201ENST00000536603 SETQ01105 290 aaPredicted RBP20.37■□□□□ 0.85
CCDC61-201ENST00000536603 NR5A1Q13285 461 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 PIK3AP1Q6ZUJ8 805 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 FAM184AQ8NB25 1140 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 ZNF577Q9BSK1 485 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 ZBED2Q9BTP6 218 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 TUT1Q9H6E5 874 aaKnown RBP20.37■□□□□ 0.85
CCDC61-201ENST00000536603 HDAC6Q9UBN7 1215 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 CHD7Q9P2D1 2997 aa20.37■□□□□ 0.85
CCDC61-201ENST00000536603 DDX39AO00148 427 aaKnown RBP20.36■□□□□ 0.85
CCDC61-201ENST00000536603 BAIAP3O94812 1187 aa20.36■□□□□ 0.85
CCDC61-201ENST00000536603 MMP1P03956 469 aa20.36■□□□□ 0.85
CCDC61-201ENST00000536603 TAP1Q03518 808 aa20.36■□□□□ 0.85
CCDC61-201ENST00000536603 TRIM50Q86XT4 487 aa20.36■□□□□ 0.85
CCDC61-201ENST00000536603 LENG9Q96B70 501 aa20.36■□□□□ 0.85
CCDC61-201ENST00000536603 C8orf76Q96K31 380 aa20.36■□□□□ 0.85
CCDC61-201ENST00000536603 C1QTNF1Q9BXJ1 281 aa20.36■□□□□ 0.85
CCDC61-201ENST00000536603 TRIP12Q14669 1992 aaPredicted RBP20.35■□□□□ 0.85
CCDC61-201ENST00000536603 EPOPA6NHQ4 379 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 BTBD18B2RXH4 712 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 DHX15O43143 795 aaKnown RBP20.35■□□□□ 0.85
CCDC61-201ENST00000536603 TDP2O95551 362 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 POU3F3P20264 500 aaPredicted RBP20.35■□□□□ 0.85
CCDC61-201ENST00000536603 ACTR2P61160 394 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 EARS2Q5JPH6 523 aaKnown RBP20.35■□□□□ 0.85
CCDC61-201ENST00000536603 GDF6Q6KF10 455 aaPredicted RBP20.35■□□□□ 0.85
CCDC61-201ENST00000536603 SESTD1Q86VW0 696 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 GTF2IRD1Q9UHL9 959 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 COG5Q9UP83 839 aa20.35■□□□□ 0.85
CCDC61-201ENST00000536603 CYP3A7-CYP3A51PA0A087WV96 503 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 MSH4O15457 936 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 CYP3A7P24462 503 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 LETM2Q2VYF4 491 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 Q4G0T1 1027 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 NEK8Q86SG6 692 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 DIS3L2Q8IYB7 885 aaKnown RBP20.34■□□□□ 0.85
CCDC61-201ENST00000536603 CAGE1Q8TC20 777 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 AFAP1L1Q8TED9 768 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 TNFRSF25Q93038 417 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 TBC1D22BQ9NU19 505 aa20.34■□□□□ 0.85
CCDC61-201ENST00000536603 ZNF215Q9UL58 517 aaPredicted RBP20.34■□□□□ 0.85
CCDC61-201ENST00000536603 REV3LO60673 3130 aa20.33■□□□□ 0.85
CCDC61-201ENST00000536603 FAM205CA6NFA0 338 aa20.33■□□□□ 0.85
CCDC61-201ENST00000536603 CCNE2O96020 404 aa20.33■□□□□ 0.85
CCDC61-201ENST00000536603 MOXD1Q6UVY6 613 aa20.33■□□□□ 0.85
CCDC61-201ENST00000536603 GLG1Q92896 1179 aa20.33■□□□□ 0.85
CCDC61-201ENST00000536603 HLA-CQ95604 372 aa20.33■□□□□ 0.85
CCDC61-201ENST00000536603 FAM122AQ96E09 287 aa20.33■□□□□ 0.85
CCDC61-201ENST00000536603 ARHGEF15O94989 841 aa20.32■□□□□ 0.84
CCDC61-201ENST00000536603 ATG7O95352 703 aa20.32■□□□□ 0.84
CCDC61-201ENST00000536603 SMIM10L2AP0DMW4 78 aa20.32■□□□□ 0.84
CCDC61-201ENST00000536603 SMIM10L2BP0DMW5 78 aa20.32■□□□□ 0.84
CCDC61-201ENST00000536603 SELPP16109 830 aa20.32■□□□□ 0.84
CCDC61-201ENST00000536603 MARK3P27448 753 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms