RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 MAGEF1Q9HAY2 307 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 LMBRD1Q9NUN5 540 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
VAMP1-205ENST00000535927 MAFBQ9Y5Q3 323 aaPredicted RBP18.2■□□□□ 0.5
VAMP1-205ENST00000535927 POTEMA6NI47 508 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 DDX39AO00148 427 aaKnown RBP18.19■□□□□ 0.5
VAMP1-205ENST00000535927 EML1O00423 815 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 SLITRK3O94933 977 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 CCT6AP40227 531 aaKnown RBP18.19■□□□□ 0.5
VAMP1-205ENST00000535927 STAT5BP51692 787 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 SKOR2Q2VWA4 1001 aaPredicted RBP18.19■□□□□ 0.5
VAMP1-205ENST00000535927 HSDL1Q3SXM5 330 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 KANK3Q6NY19 840 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 OTUD6AQ7L8S5 288 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 RNF180Q86T96 592 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 ELOA2Q8IYF1 753 aaPredicted RBP18.19■□□□□ 0.5
VAMP1-205ENST00000535927 EXOC8Q8IYI6 725 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 SNX29Q8TEQ0 813 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 SYMPKQ92797 1274 aaKnown RBP18.19■□□□□ 0.5
VAMP1-205ENST00000535927 TIGD1Q96MW7 591 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 LRRC27Q9C0I9 530 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.19■□□□□ 0.5
VAMP1-205ENST00000535927 XPNPEP3Q9NQH7 507 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 PAK6Q9NQU5 681 aaPredicted RBP18.19■□□□□ 0.5
VAMP1-205ENST00000535927 ZNF302Q9NR11 478 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 NRBP2Q9NSY0 501 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 KCNH3Q9ULD8 1083 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 HPSEQ9Y251 543 aa18.19■□□□□ 0.5
VAMP1-205ENST00000535927 DOCK5Q9H7D0 1870 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 CABYRO75952 493 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 CCND3P30281 292 aaPredicted RBP18.18■□□□□ 0.5
VAMP1-205ENST00000535927 TCF7P36402 384 aaPredicted RBP18.18■□□□□ 0.5
VAMP1-205ENST00000535927 FAM160A1Q05DH4 1040 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 TRIM32Q13049 653 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 FSCN1Q16658 493 aaKnown RBP18.18■□□□□ 0.5
VAMP1-205ENST00000535927 CATSPER3Q86XQ3 398 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 KLHDC9Q8NEP7 349 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 RASSF8Q8NHQ8 419 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 AFG1LQ8WV93 481 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 GJA10Q969M2 543 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 ZNF333Q96JL9 665 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 CHAMP1Q96JM3 812 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 KATNAL1Q9BW62 490 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 ZNF215Q9UL58 517 aaPredicted RBP18.18■□□□□ 0.5
VAMP1-205ENST00000535927 DNM3Q9UQ16 869 aa18.18■□□□□ 0.5
VAMP1-205ENST00000535927 BACH1O14867 736 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 CHMP2AO43633 222 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 MMP3P08254 477 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 SPATA31C1P0DKV0 1188 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 SYKP43405 635 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 GRIN1Q05586 938 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 XKR3Q5GH77 459 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 RRAGBQ5VZM2 374 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 SWSAP1Q6NVH7 229 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 FSIP1Q8NA03 581 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 COPS5Q92905 334 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 EPSTI1Q96J88 318 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 MMTAG2Q9BU76 263 aaKnown RBP18.17■□□□□ 0.5
VAMP1-205ENST00000535927 ANKEF1Q9NU02 776 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 ERAP1Q9NZ08 941 aa18.17■□□□□ 0.5
VAMP1-205ENST00000535927 HOOK1Q9UJC3 728 aaKnown RBP18.17■□□□□ 0.5
VAMP1-205ENST00000535927 DBR1Q9UK59 544 aaKnown RBP18.17■□□□□ 0.5
VAMP1-205ENST00000535927 MOXD2PA6NHM9 499 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 ADAMTS4O75173 837 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 MYL1P05976 194 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 GJB1P08034 283 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 AMPD3Q01432 767 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 TMEM119Q4V9L6 283 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 GNASQ5JWF2 1037 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 LHX8Q68G74 356 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 PDXDC2PQ6P474 469 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 TPH2Q8IWU9 490 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 SH3TC2Q8TF17 1288 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 BBXQ8WY36 941 aaPredicted RBP18.16■□□□□ 0.5
VAMP1-205ENST00000535927 GLG1Q92896 1179 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 KCND2Q9NZV8 630 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 GABBR1Q9UBS5 961 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 IGSF9BQ9UPX0 1349 aa18.16■□□□□ 0.5
VAMP1-205ENST00000535927 ADCY6O43306 1168 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 C6orf222P0C671 652 aaPredicted RBP18.15■□□□□ 0.5
VAMP1-205ENST00000535927 SLFN14P0C7P3 912 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 CCL5P13501 91 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 PFKFB1P16118 471 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 DYDC2Q96IM9 177 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 LXNQ9BS40 222 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 NIFKQ9BYG3 293 aaKnown RBP18.15■□□□□ 0.5
VAMP1-205ENST00000535927 RNF208Q9H0X6 261 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 SYNRGQ9UMZ2 1314 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 KAT6AQ92794 2004 aa18.15■□□□□ 0.5
VAMP1-205ENST00000535927 H3BRB1 525 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 CTAGE5O15320 804 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 HBP1O60381 514 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 MED24O75448 989 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 EYA4O95677 639 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 LGALS2P05162 132 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 STAT6P42226 847 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 GRB10Q13322 594 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 SPECC1Q5M775 1068 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms