RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 SEC16BQ96JE7 1060 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 GOPCQ9HD26 462 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 OSGEPQ9NPF4 335 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 RIC8AQ9NPQ8 531 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 PLCB1Q9NQ66 1216 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 TMEM59LQ9UK28 342 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 BCS1LQ9Y276 419 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 DLEC1Q9Y238 1755 aa14.66□□□□□ -0.06
HDAC4-214ENST00000535493 RASSF9O75901 435 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 KRT18P05783 430 aaKnown RBP14.65□□□□□ -0.06
HDAC4-214ENST00000535493 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.067e-6■■□□□ 13.4
HDAC4-214ENST00000535493 COBLL1Q53SF7 1204 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 EP400NLQ6ZTU2 488 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 DAAM2Q86T65 1068 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 GPBP1Q86WP2 473 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 NLRP3Q96P20 1036 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 EMILIN3Q9NT22 766 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 DDX25Q9UHL0 483 aaKnown RBP14.65□□□□□ -0.06
HDAC4-214ENST00000535493 GGT7Q9UJ14 662 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 EP400Q96L91 3159 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 TRAPPC3O43617 180 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 SHBGP04278 402 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 ABCB4P21439 1286 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 BTDP43251 543 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 ADCY7P51828 1080 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 KCNA1Q09470 495 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 PICALMQ13492 652 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 PTF1AQ7RTS3 328 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 PEX26Q7Z412 305 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 CPLX4Q7Z7G2 160 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 FAM228AQ86W67 206 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 NBPF5PQ86XG9 351 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-214ENST00000535493 SCFD2Q8WU76 684 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 GANQ9H2C0 597 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 LUC7LQ9NQ29 371 aaKnown RBP14.65□□□□□ -0.06
HDAC4-214ENST00000535493 NAGPAQ9UK23 515 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 PCDHA12Q9UN75 941 aa14.65□□□□□ -0.06
HDAC4-214ENST00000535493 POTEFA5A3E0 1075 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L15C9J2P7 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L13C9JLJ4 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L11C9JVI0 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L18D6R9N7 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L22D6RA61 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L17D6RBQ6 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L19D6RCP7 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L20D6RJB6 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 CLIC2O15247 247 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 POTEIP0CG38 1075 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 UCHL3P15374 230 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP11P51784 963 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 CDR1P51861 262 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 PSMC6P62333 389 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L24Q0WX57 530 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 ZNF211Q13398 564 aaPredicted RBP14.65□□□□□ -0.07
HDAC4-214ENST00000535493 BYSLQ13895 437 aaKnown RBP14.65□□□□□ -0.07
HDAC4-214ENST00000535493 LLGL1Q15334 1064 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 USP17L6PQ6QN14 398 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 POTEGQ6S5H5 508 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 POTEEQ6S8J3 1075 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 SLC30A10Q6XR72 485 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 GLG1Q92896 1179 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 CHORDC1Q9UHD1 332 aaPredicted RBP14.65□□□□□ -0.07
HDAC4-214ENST00000535493 PNMA2Q9UL42 364 aa14.65□□□□□ -0.07
HDAC4-214ENST00000535493 A6NNZ2 444 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 PPP1R11O60927 126 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-214ENST00000535493 MYBP10242 640 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 SMTNP53814 917 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 IFFO1Q0D2I5 559 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 SEMA3FQ13275 785 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 DDB1Q16531 1140 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 TUBB8Q3ZCM7 444 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 AADACL2Q6P093 401 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 LINC00116Q8NCU8 138 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 TBC1D31Q96DN5 1066 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 MTFR1LQ9H019 292 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 HDAC9Q9UKV0 1011 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 SFI1A8K8P3 1242 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 PGRMC1O00264 195 aaKnown RBP14.64□□□□□ -0.07
HDAC4-214ENST00000535493 CAND2O75155 1236 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 FGGP02679 453 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 PLA2G4BP0C869 781 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 CASP4P49662 377 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 PPP2R2AP63151 447 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 PPP4R3AQ6IN85 833 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 CYB5D1Q6P9G0 228 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 TEX11Q8IYF3 940 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 FUKQ8N0W3 1084 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 LRRC57Q8N9N7 239 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 AIPL1Q9NZN9 384 aa14.64□□□□□ -0.07
HDAC4-214ENST00000535493 UTRNP46939 3433 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 MYH4Q9Y623 1939 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 ZNF335Q9H4Z2 1342 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-214ENST00000535493 BAG3O95817 575 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 RPSAP08865 295 aaKnown RBP14.63□□□□□ -0.07
HDAC4-214ENST00000535493 CCDC172P0C7W6 258 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 SCP2P22307 547 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 TMEM119Q4V9L6 283 aa14.63□□□□□ -0.07
HDAC4-214ENST00000535493 TPCN2Q8NHX9 752 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms