RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 WNT8AQ9H1J5 351 aa25.67■■□□□ 1.7
SFSWAP-204ENST00000535399 SETD4Q9NVD3 440 aa25.67■■□□□ 1.7
SFSWAP-204ENST00000535399 LTBP2Q14767 1821 aa25.67■■□□□ 1.7
SFSWAP-204ENST00000535399 PSAPP07602 524 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 ADAM17P78536 824 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 PTK7Q13308 1070 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 PLCB4Q15147 1175 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 FAM160B1Q5W0V3 765 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 LMBR1Q8WVP7 490 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 INTS4Q96HW7 963 aaKnown RBP25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 UBE2OQ9C0C9 1292 aaKnown RBP25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 ZNF302Q9NR11 478 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 DISC1Q9NRI5 854 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 VAV3Q9UKW4 847 aa25.66■■□□□ 1.7
SFSWAP-204ENST00000535399 NRCAMQ92823 1304 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 TREHO43280 583 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 CHMP2AO43633 222 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 ATP4AP20648 1035 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 SFNP31947 248 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 SLC26A2P50443 739 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 PPFIA1Q13136 1202 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 GNL2Q13823 731 aaKnown RBP25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 TRIM71Q2Q1W2 868 aaKnown RBP25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 PDXDC2PQ6P474 469 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 SERINC5Q86VE9 423 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 RDM1Q8NG50 284 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 ATP6V0A1Q93050 837 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 WNT8BQ93098 351 aa25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 MAFBQ9Y5Q3 323 aaPredicted RBP25.65■■□□□ 1.7
SFSWAP-204ENST00000535399 H3BQV1 296 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 PITPNM1O00562 1244 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 GNAT1P11488 350 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 ATP2B1P20020 1258 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 JAK3P52333 1124 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 EPHB4P54760 987 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 CCL23P55773 120 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 FPGSQ05932 587 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 RBL2Q08999 1139 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 BFSP2Q13515 415 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 LARP1BQ659C4 914 aaKnown RBP25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 TMEM199Q8N511 208 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 CAGE1Q8TC20 777 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 GABBR1Q9UBS5 961 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 SAMM50Q9Y512 469 aa25.64■■□□□ 1.7
SFSWAP-204ENST00000535399 POTEB3A0JP26 581 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 NEMFO60524 1076 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 INSRRP14616 1297 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 CSF2RAP15509 400 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 TRAPPC10P48553 1259 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 PPP2R5CQ13362 524 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 GRIK4Q16099 956 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 POTEBQ6S5H4 581 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 MIER3Q7Z3K6 550 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 MTMR9Q96QG7 549 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 TRPC6Q9Y210 931 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 IGSF9BQ9UPX0 1349 aa25.63■■□□□ 1.69
SFSWAP-204ENST00000535399 EML1O00423 815 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 MCM7P33993 719 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 CALCRLQ16602 461 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 MARCH8Q5T0T0 291 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 MCTP1Q6DN14 999 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 HSCBQ8IWL3 235 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 SLFN12Q8IYM2 578 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 ATP8B4Q8TF62 1192 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 TMEM60Q9H2L4 133 aa25.62■■□□□ 1.69
SFSWAP-204ENST00000535399 TRIOBPQ9H2D6 2365 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 MBLAC1A4D2B0 266 aaPredicted RBP25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 ZNF862O60290 1169 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 MARCH6O60337 910 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 HBP1O60381 514 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 BAG4O95429 457 aaKnown RBP25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 TOB1P50616 345 aaPredicted RBP25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 PPIGQ13427 754 aaKnown RBP eCLIP25.61■■□□□ 1.695e-7■■□□□ 11.5
SFSWAP-204ENST00000535399 ZNF174Q15697 407 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 UGCGQ16739 394 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 TTC38Q5R3I4 469 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 CCDC155Q8N6L0 562 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 RETREG2Q8NC44 543 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 VWCEQ96DN2 955 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 SCLYQ96I15 445 aa25.61■■□□□ 1.69
SFSWAP-204ENST00000535399 A0A1W2PPC1 479 aa25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 RRN3P2A6NIE6 340 aa25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 IQCF3P0C7M6 154 aa25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 CKBP12277 381 aa25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 SPIRE1Q08AE8 756 aa25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 ORC2Q13416 577 aaPredicted RBP25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 C16orf59Q7L2K0 433 aa25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 TNPO1Q92973 898 aaKnown RBP25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 FOXD4L1Q9NU39 408 aa25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 NOL7Q9UMY1 257 aaKnown RBP25.6■■□□□ 1.69
SFSWAP-204ENST00000535399 IGBP1P78318 339 aa25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 NBR1Q14596 966 aa25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 HABP4Q5JVS0 413 aaKnown RBP25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 TRAF7Q6Q0C0 670 aa25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 RUFY4Q6ZNE9 571 aa25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 TDHQ8IZJ6 230 aa25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 IL23AQ9NPF7 189 aa25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 TUBE1Q9UJT0 475 aa25.59■■□□□ 1.69
SFSWAP-204ENST00000535399 ZBTB42B2RXF5 422 aa25.58■■□□□ 1.69
SFSWAP-204ENST00000535399 SELPP16109 830 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms