RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SYNDIG1Q9H7V2 258 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 GOLGA8MH3BSY2 632 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 SASH1O94885 1247 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 ESRRBO95718 433 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 ZSCAN20P17040 1043 aaPredicted RBP13.63□□□□□ -0.23
SPG11-203ENST00000535302 PTPN12Q05209 780 aaKnown RBP13.63□□□□□ -0.23
SPG11-203ENST00000535302 ART3Q13508 389 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 ADGRL2O95490 1459 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 TYW5A2RUC4 315 aaKnown RBP13.63□□□□□ -0.23
SPG11-203ENST00000535302 HLA-DPA1P20036 260 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 CC2D2BQ6DHV5 1058 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 TRIM67Q6ZTA4 783 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 SMYD3Q9H7B4 428 aa13.63□□□□□ -0.23
SPG11-203ENST00000535302 H0YCG3 227 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 ZNF658Q5TYW1 1059 aaPredicted RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 METTL23Q86XA0 190 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 EFCAB8A8MWE9 144 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 EVI5O60447 810 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 FOSP01100 380 aaPredicted RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 AFF4Q9UHB7 1163 aaKnown RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 BCAP29Q9UHQ4 241 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 CCDC195A0A1B0GUA6 201 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 PPP6R2O75170 966 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 C10orf76Q5T2E6 689 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 CROCCP2Q86T23 111 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 PFDN6O15212 129 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 CYP27A1Q02318 531 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 PDCD2Q16342 344 aaPredicted RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 RNF26Q9BY78 433 aaPredicted RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 ERFP50548 548 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 USP14P54578 494 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 STX1BP61266 288 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 SNCBQ16143 134 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 HAUS4Q9H6D7 363 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 KANSL2Q9H9L4 492 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 INTS9Q9NV88 658 aaKnown RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 ANKRD65E5RJM6 399 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 EEF1DP29692 281 aaKnown RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 CDKL2Q92772 493 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 RAVER2Q9HCJ3 691 aaKnown RBP13.62□□□□□ -0.23
SPG11-203ENST00000535302 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
SPG11-203ENST00000535302 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 NEDD4P46934 1319 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PLS3P13797 630 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 EIF4A3P38919 411 aaKnown RBP13.61□□□□□ -0.23
SPG11-203ENST00000535302 FAM83BQ5T0W9 1011 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PAGE5Q96GU1 130 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 Q9H521 79 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 NHEJ1Q9H9Q4 299 aaPredicted RBP13.61□□□□□ -0.23
SPG11-203ENST00000535302 GH2P01242 217 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 MCAMP43121 646 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PMLP29590 882 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 ARHGDIAP52565 204 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 CCNA1P78396 465 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 UBE3AQ05086 875 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PDXDC2PQ6P474 469 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 SEPT12Q8IYM1 358 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 HOMER3Q9NSC5 361 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PEX3P56589 373 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 SLMAPQ14BN4 828 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 DALRD3Q5D0E6 543 aaKnown RBP13.61□□□□□ -0.23
SPG11-203ENST00000535302 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 RINLQ6ZS11 566 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 ARMC9Q7Z3E5 817 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PRKAG2Q9UGJ0 569 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 ROBO2Q9HCK4 1378 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 MMP10P09238 476 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 OCM2P0CE71 109 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 OCMP0CE72 109 aaPredicted RBP13.61□□□□□ -0.23
SPG11-203ENST00000535302 AOC3Q16853 763 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 IQCDQ96DY2 449 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 COG4Q9H9E3 785 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 TYW1Q9NV66 732 aaKnown RBP13.61□□□□□ -0.23
SPG11-203ENST00000535302 CAPN11Q9UMQ6 739 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 TCP1P17987 556 aaKnown RBP13.61□□□□□ -0.23
SPG11-203ENST00000535302 THNSL1Q8IYQ7 743 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 FBXL13Q8NEE6 735 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 NCLNQ969V3 563 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 SLC13A4Q9UKG4 626 aa13.61□□□□□ -0.23
SPG11-203ENST00000535302 ATP10DQ9P241 1426 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 ABCB11O95342 1321 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 SMAD5Q99717 465 aaKnown RBP13.6□□□□□ -0.23
SPG11-203ENST00000535302 TMEM260Q9NX78 707 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
SPG11-203ENST00000535302 ETF1P62495 437 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms