RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TMEM47Q9BQJ4 181 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 NACAP1Q9BZK3 213 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 CPVLQ9H3G5 476 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 POMKQ9H5K3 350 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 LIMD1Q9UGP4 676 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 TTC3P53804 2025 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 FSCN2O14926 492 aa9.7□□□□□ -0.86
CLIP1-206ENST00000535290 TOP1P11387 765 aaKnown RBP9.7□□□□□ -0.86
CLIP1-206ENST00000535290 UBA1P22314 1058 aaKnown RBP9.7□□□□□ -0.86
CLIP1-206ENST00000535290 RUFY4Q6ZNE9 571 aa9.7□□□□□ -0.86
CLIP1-206ENST00000535290 SIRT2Q8IXJ6 389 aa9.7□□□□□ -0.86
CLIP1-206ENST00000535290 LMBR1Q8WVP7 490 aa9.7□□□□□ -0.86
CLIP1-206ENST00000535290 GPKOWQ92917 476 aaPredicted RBP eCLIP9.7□□□□□ -0.86
CLIP1-206ENST00000535290 ZFP91Q96JP5 570 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-206ENST00000535290 NAPBQ9H115 298 aa9.7□□□□□ -0.86
CLIP1-206ENST00000535290 AGO3Q9H9G7 860 aaKnown RBP9.7□□□□□ -0.86
CLIP1-206ENST00000535290 PXMP2Q9NR77 195 aa9.7□□□□□ -0.86
CLIP1-206ENST00000535290 FAM208BQ5VWN6 2430 aa9.7□□□□□ -0.86
CLIP1-206ENST00000535290 RAB11FIP3O75154 756 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 WEE2P0C1S8 567 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 GNAT1P11488 350 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 HOXB8P17481 243 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-206ENST00000535290 ARHGAP4P98171 946 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 UBE3AQ05086 875 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 MGAT3Q09327 533 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 APOBRQ0VD83 1088 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 FBXO47Q5MNV8 452 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 TRIM50Q86XT4 487 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 NPAS4Q8IUM7 802 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 RIN2Q8WYP3 895 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-206ENST00000535290 RUBCNQ92622 972 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 MLXIPQ9HAP2 919 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 ERVK-5Q9HDB9 667 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 TELO2Q9Y4R8 837 aa9.69□□□□□ -0.86
CLIP1-206ENST00000535290 FSD2A1L4K1 749 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 HIDE1A8MVS5 230 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 FOXP2O15409 715 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 FGF18O76093 207 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 GOLGA8HP0CJ92 632 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 SRGAP2BP0DMP2 458 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 SNHG28P0DPA3 235 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 MYCLP12524 364 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-206ENST00000535290 CD52P31358 61 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 ATXN1P54253 815 aaKnown RBP9.68□□□□□ -0.86
CLIP1-206ENST00000535290 PLPP4Q5VZY2 271 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 MCF2L2Q86YR7 1114 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 ZDHHC14Q8IZN3 488 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 IL31RAQ8NI17 732 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 RASGRP4Q8TDF6 673 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 RTP3Q9BQQ7 232 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 PDCD2LQ9BRP1 358 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 ADAM7Q9H2U9 754 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 TMEM260Q9NX78 707 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 HCSTQ9UBK5 93 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 PCDHB12Q9Y5F1 795 aa9.68□□□□□ -0.86
CLIP1-206ENST00000535290 ABCB11O95342 1321 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 SMARCA5O60264 1052 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-206ENST00000535290 ZFYP08048 801 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-206ENST00000535290 HSPD1P10809 573 aaKnown RBP9.67□□□□□ -0.86
CLIP1-206ENST00000535290 IBSPP21815 317 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-206ENST00000535290 CDC37Q16543 378 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-206ENST00000535290 TSHZ3Q63HK5 1081 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 KCNV1Q6PIU1 500 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 TSHZ1Q6ZSZ6 1077 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 VSIG10LQ86VR7 867 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 SIX5Q8N196 739 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 TDRD5Q8NAT2 981 aaKnown RBP9.67□□□□□ -0.86
CLIP1-206ENST00000535290 NECTIN4Q96NY8 510 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 MAF1Q9H063 256 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 ECHDC1Q9NTX5 307 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 CDY2AQ9Y6F7 541 aa9.67□□□□□ -0.86
CLIP1-206ENST00000535290 ANKRD11Q6UB99 2663 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-206ENST00000535290 DCDC2BA2VCK2 349 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 NOP56O00567 594 aaKnown RBP9.66□□□□□ -0.86
CLIP1-206ENST00000535290 OPLAHO14841 1288 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 ORC4O43929 436 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 CFBP00751 764 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 FGRP09769 529 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 STAG3L1P0CL83 205 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 TGFB3P10600 412 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 SCG2P13521 617 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 SPOUT1Q5T280 376 aaKnown RBP9.66□□□□□ -0.86
CLIP1-206ENST00000535290 KIAA0319Q5VV43 1072 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 PDE12Q6L8Q7 609 aaKnown RBP9.66□□□□□ -0.86
CLIP1-206ENST00000535290 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 KANK3Q6NY19 840 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 TAF2Q6P1X5 1199 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 THNSL1Q8IYQ7 743 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 C12orf76Q8N812 135 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-206ENST00000535290 SUMF1Q8NBK3 374 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 FEZF2Q8TBJ5 459 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 PANK1Q8TE04 598 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 DNAJB3Q8WWF6 145 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 GPR20Q99678 358 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 TCF25Q9BQ70 676 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 AAASQ9NRG9 546 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 ZFYVE26Q68DK2 2539 aa9.66□□□□□ -0.86
CLIP1-206ENST00000535290 MYH7P12883 1935 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms